| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1351 |
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| Symbol | |
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| ID | 8807117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1442393 |
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| End bp | 1443979 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003460594 |
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| Protein GI | 289208528 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.225814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0380363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAGGC GTTACCGTGC CGCCCTGCCA CTGCTGGCCT CGCTGGCCCT GGCCATTCCC
GCCACTGCAG AGGATGACGA GCCGACAGGC AACGGGTTGC GCCTATCGTT GCCGGCAGAG
CAACTCATGG CCATCGATCC GTTTGGCCGT GAGCCCGTGG GCGAGGAGAC CCTGTCCCTC
GAAGAAGCTG TCGCACGGGC GCTGGAAGGG AACCGTGGCC TGCGCGCGGA GCGCCTGCAG
ACCGCGATTG CCGGTACCTT CGAAGCACAG GAGCGCGCCG TATTCGATCC CGAGCTGTTT
GCCGAGGTCG AGGTCACCCG GGACCAGAGC GTACGCCTGC TGGAGGAGGC CGAGGAAGAC
ACCGACGAGG TCACCTCGAC CCAGCGTTTT GGCGAGGCCG GTGTTCGTCA GTCGCTGCCG
ACGGGTACCG ACCTGAGCCT GTCCGTGCGC AGCCAGCGCG CGACCAGTTC GCGCGTCGAT
CAAACCCAGT TCTCGTCCCG CGCCGGCCTG ACGCTCACCC AGGCCCTGCT GCGAGGTGGG
CGCATCGAAT CCAATCTGGT GCGCCTGCAA CAGGCCGGCC TGGACGTCGA GGCAACCGAA
TACGAAGTCC GCGCGTTCGT CGAACAGCTC ATAACCGACG TGGAGACCGC CTACTGGGAT
CTGGTGCTGG CCGGCGAGCA GATCGAGATT TTCGAGGAGG CCCTGGCCGT CGCGAGCCAG
CAACTCGACG AGACCCAGCG CCGCATCGAT GCCGGCGATC GCCCGGAAAC CGAAGCCGTC
TCTGCACGCG CCGAGGTCGC CCTGCGGCGC CAGGGGCTCA TCGACGCGCG CAGCGAGCGT
GCGCGCGCGC AAGACACCCT CGCGCGCCTG ATTCAGGGTG ATGGAGGCCT GTGGGACACC
CGGCTGCTGA CGAGTTCCGA GCCGGCCCTC GACCGCTACG AGATCGAACC ACTCGATACC
TACGTGGCAC TGGCGCGCGA CCATCGCGCC GACCTCAACG AGACCCGCCT GCGGGTCCAG
CGCGACGAGC TGGAGGTCAT TCGCACCCGC AATGGCCTCC TCCCCCGCCT GGACTTCTTT
GTCACGCTTG GACAATCGGG CTATGCGGAC AGCTTCGGGC GTACCTTCCG CGACACCCAG
GGCGACGGCT ACGACCTCGC CGCCGGACTG CGGTTCGAGA TGCCGATCGG CAACCGTGCC
GCCGAGGCGG AACACACACG CGCGCGCCTG ACGCGCCAGC AAATCAGCGA AACCCTCGCC
AATCTGGAGC AGTTGGCGAT CGAAGACGTG CGCGCCGTCT GGTTCGACGC CGCCCGCGTT
CGGGAGCAGA TTCGCGCCCA GGAAGAGACC ATCGAGCTCC AGGAAGAACT CTTGCGCGTG
GAACAGACCC GCTATCGCGT CGGCGCAGGG ACGGCACTGG CCGTGGCCCA GGCCCAGCGT
GACTTGCTCG AGAGCCGTCT GCGCCTGACC GAGACCGTCG TGCGCTTTCG CCAGCTGACC
ACCGAACTCC TGAACGCAAG TGGTACGCTA CTGCTGCACC GCGGCATCGA CGCGCCGGGC
TCTGAACGCG TGGACCTGCG TATGTAG
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| Protein sequence | MPRRYRAALP LLASLALAIP ATAEDDEPTG NGLRLSLPAE QLMAIDPFGR EPVGEETLSL
EEAVARALEG NRGLRAERLQ TAIAGTFEAQ ERAVFDPELF AEVEVTRDQS VRLLEEAEED
TDEVTSTQRF GEAGVRQSLP TGTDLSLSVR SQRATSSRVD QTQFSSRAGL TLTQALLRGG
RIESNLVRLQ QAGLDVEATE YEVRAFVEQL ITDVETAYWD LVLAGEQIEI FEEALAVASQ
QLDETQRRID AGDRPETEAV SARAEVALRR QGLIDARSER ARAQDTLARL IQGDGGLWDT
RLLTSSEPAL DRYEIEPLDT YVALARDHRA DLNETRLRVQ RDELEVIRTR NGLLPRLDFF
VTLGQSGYAD SFGRTFRDTQ GDGYDLAAGL RFEMPIGNRA AEAEHTRARL TRQQISETLA
NLEQLAIEDV RAVWFDAARV REQIRAQEET IELQEELLRV EQTRYRVGAG TALAVAQAQR
DLLESRLRLT ETVVRFRQLT TELLNASGTL LLHRGIDAPG SERVDLRM
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