Gene TK90_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1289 
Symbol 
ID8807053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand+ 
Start bp1365402 
End bp1365962 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content65% 
IMG OID 
ProductSmr protein/MutS2 
Protein accessionYP_003460533 
Protein GI289208467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.553712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCG GTGATGATCC CAACGACATG CCCGATGACG CGGACGAATT CCTGCGCGCG 
ATTGGCGATG TGCGACGCCT GCACCATGAC CAGGCCGACA CCGGCAAGCC GCGCCCCCCT 
GCCCGCGCGC ACCAACGCGA CCGCGACGAG GCCGCTGCGC ATTCCGACTG GCTCAGCGAT 
CCGATCGGCG CCTCCGACCT CCAGCCGGGT GACGAACTGC GTTATGCCCG CGACGGGATC 
AGCCACCGCA TCTTTCGCAA ACTGCGTCAT GGCCATTACC GCGTGGAAGA TGAGCTCGAC 
ATGCACGGCA TGTTCGCGGA CGAGGCACGA CAGGCGATCG GGCAGTTTCT CGATCAGGCC 
CGTGCGGATG GGCGCCTCTG CGTCCGTGTG GTGCATGGCA AGGGCATGCG CTCGCGGCAA 
AAAGGGCCCG TGCTGAAGGG ACTCACCGAT CACTGGCTGC GCCAGCGCCA CGACGTACTG 
GCGTTTTGCT CCGCACCGCC CGCCGATGGT GGCACCGGTG CGGTGTATGT GCTGTTGAAA 
CGACTGAAAA CCACGCGTTA G
 
Protein sequence
MNSGDDPNDM PDDADEFLRA IGDVRRLHHD QADTGKPRPP ARAHQRDRDE AAAHSDWLSD 
PIGASDLQPG DELRYARDGI SHRIFRKLRH GHYRVEDELD MHGMFADEAR QAIGQFLDQA 
RADGRLCVRV VHGKGMRSRQ KGPVLKGLTD HWLRQRHDVL AFCSAPPADG GTGAVYVLLK 
RLKTTR