Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1227 |
Symbol | |
ID | 8806990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1304068 |
End bp | 1305342 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | integrase family protein |
Protein accession | YP_003460472 |
Protein GI | 289208406 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.149921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.536296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAA CCAAGAAACT GACCAAGCGG GTCTGCGATG CCGCCACCCC ACCGGAGAAA GGGACCACGT TCATCTGGGA CAGTGCGGTG GCCGGGTTCG GCCTGCGCGT GACCGCCGCC GGTGCCAAGG CGTTCGTCTG GCAGGGGCGG GTTAACGGAC GAAGCCAGCG GCTGACCATC GGCAAACCCG GGGCCCTGAC CGTGGAGAAG GCCAGGGCGG AGGCGAAGCG GATAGCCGGG GAGGTGGCGA GCGGCAAGGA CCCGCGAGCG GAGAAGCACG CGCGCAAGGT TAAGGCCCTG ACTCTGCGCG AAGCCGTGCG GGAATACCGG GACGCCCGGC ACCTGGCGGA CACCACCCGG GACAGTTTCG ACCGGGCCAT GAAGGCGCTG TCGGACTGGA TGGCCCGGCC CGTCACCGAG ATCACCCGGG ACATGGTGGC GAGGCGCCAC CGCAAGCTGG GGGAGGACTC CCCGGCCTTC GCGAACCTGG CCTTCCGCTA CCTGCGGGCC GTGCTGAATC ACGCCAGCGA AGCCCATGCC TACCCGGACG GCCGCCCCCT GCTGCCCGAC AATCCCGTGA AGCGCCTGTC CGCCACCAAG GCTTGGTACC GGGTGGACCG GCGCCGGACG TACATAGAGC GGCACGAGCT GCGGCCCTGG ATGCAAGCTG TTCAGGGGTT GGCCCACCCG CCGGAGCGGG AACCGGGGGA GGGCAAGACC AAGCCGAAGC TACGGAACGG CGCCATTGCC CGCGACGTGT TCATGGTGCT GGTACTGACC GGCCTGCGGC GGAATGAGGC CCTGGGCTTG CGGTGGGAGG ACGTGAGCTT TGCCGGCCGG ACGTTGACGA TCCCGGACCC CAAAAACTAC CAGCCGCACA CTCTGCCGCT GTCGGACTAC CTGGTGGAAC TGCTGAAGGC CCGCCAGCAG GAGAGCGGGG GCGAGTACGT GTTCAGCGAC GCGGCCGGCA CCCGGTTCCA GAACCTTCGG TACGCCGTGG ACCGGGTGGC CGAAGTCTCC GGCGTGCGCG CCATGCCCCA CGACCTGCGC CGCACCTTCG CCACCGTGGC CGAATCCCTC GACGTTCCGG CCTACGCGGT CAAGGCCCTG CTGAACCACA AGACCACGGG GGACGTGACC GCCGGTTATA TCCAGATGAC GCCGGAGCGC CTGCGAGGGC CGATGCAGCG CATCACGGAC TTCATGCTGG CCGCCGGCGG TCTGCGGGAT GGTGCGGACG TGGTGCCCCT AGGAGCCGCG GAGGCCCGGG CATGA
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Protein sequence | MAETKKLTKR VCDAATPPEK GTTFIWDSAV AGFGLRVTAA GAKAFVWQGR VNGRSQRLTI GKPGALTVEK ARAEAKRIAG EVASGKDPRA EKHARKVKAL TLREAVREYR DARHLADTTR DSFDRAMKAL SDWMARPVTE ITRDMVARRH RKLGEDSPAF ANLAFRYLRA VLNHASEAHA YPDGRPLLPD NPVKRLSATK AWYRVDRRRT YIERHELRPW MQAVQGLAHP PEREPGEGKT KPKLRNGAIA RDVFMVLVLT GLRRNEALGL RWEDVSFAGR TLTIPDPKNY QPHTLPLSDY LVELLKARQQ ESGGEYVFSD AAGTRFQNLR YAVDRVAEVS GVRAMPHDLR RTFATVAESL DVPAYAVKAL LNHKTTGDVT AGYIQMTPER LRGPMQRITD FMLAAGGLRD GADVVPLGAA EARA
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