Gene TK90_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1227 
Symbol 
ID8806990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1304068 
End bp1305342 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content69% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003460472 
Protein GI289208406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.149921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.536296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA CCAAGAAACT GACCAAGCGG GTCTGCGATG CCGCCACCCC ACCGGAGAAA 
GGGACCACGT TCATCTGGGA CAGTGCGGTG GCCGGGTTCG GCCTGCGCGT GACCGCCGCC
GGTGCCAAGG CGTTCGTCTG GCAGGGGCGG GTTAACGGAC GAAGCCAGCG GCTGACCATC
GGCAAACCCG GGGCCCTGAC CGTGGAGAAG GCCAGGGCGG AGGCGAAGCG GATAGCCGGG
GAGGTGGCGA GCGGCAAGGA CCCGCGAGCG GAGAAGCACG CGCGCAAGGT TAAGGCCCTG
ACTCTGCGCG AAGCCGTGCG GGAATACCGG GACGCCCGGC ACCTGGCGGA CACCACCCGG
GACAGTTTCG ACCGGGCCAT GAAGGCGCTG TCGGACTGGA TGGCCCGGCC CGTCACCGAG
ATCACCCGGG ACATGGTGGC GAGGCGCCAC CGCAAGCTGG GGGAGGACTC CCCGGCCTTC
GCGAACCTGG CCTTCCGCTA CCTGCGGGCC GTGCTGAATC ACGCCAGCGA AGCCCATGCC
TACCCGGACG GCCGCCCCCT GCTGCCCGAC AATCCCGTGA AGCGCCTGTC CGCCACCAAG
GCTTGGTACC GGGTGGACCG GCGCCGGACG TACATAGAGC GGCACGAGCT GCGGCCCTGG
ATGCAAGCTG TTCAGGGGTT GGCCCACCCG CCGGAGCGGG AACCGGGGGA GGGCAAGACC
AAGCCGAAGC TACGGAACGG CGCCATTGCC CGCGACGTGT TCATGGTGCT GGTACTGACC
GGCCTGCGGC GGAATGAGGC CCTGGGCTTG CGGTGGGAGG ACGTGAGCTT TGCCGGCCGG
ACGTTGACGA TCCCGGACCC CAAAAACTAC CAGCCGCACA CTCTGCCGCT GTCGGACTAC
CTGGTGGAAC TGCTGAAGGC CCGCCAGCAG GAGAGCGGGG GCGAGTACGT GTTCAGCGAC
GCGGCCGGCA CCCGGTTCCA GAACCTTCGG TACGCCGTGG ACCGGGTGGC CGAAGTCTCC
GGCGTGCGCG CCATGCCCCA CGACCTGCGC CGCACCTTCG CCACCGTGGC CGAATCCCTC
GACGTTCCGG CCTACGCGGT CAAGGCCCTG CTGAACCACA AGACCACGGG GGACGTGACC
GCCGGTTATA TCCAGATGAC GCCGGAGCGC CTGCGAGGGC CGATGCAGCG CATCACGGAC
TTCATGCTGG CCGCCGGCGG TCTGCGGGAT GGTGCGGACG TGGTGCCCCT AGGAGCCGCG
GAGGCCCGGG CATGA
 
Protein sequence
MAETKKLTKR VCDAATPPEK GTTFIWDSAV AGFGLRVTAA GAKAFVWQGR VNGRSQRLTI 
GKPGALTVEK ARAEAKRIAG EVASGKDPRA EKHARKVKAL TLREAVREYR DARHLADTTR
DSFDRAMKAL SDWMARPVTE ITRDMVARRH RKLGEDSPAF ANLAFRYLRA VLNHASEAHA
YPDGRPLLPD NPVKRLSATK AWYRVDRRRT YIERHELRPW MQAVQGLAHP PEREPGEGKT
KPKLRNGAIA RDVFMVLVLT GLRRNEALGL RWEDVSFAGR TLTIPDPKNY QPHTLPLSDY
LVELLKARQQ ESGGEYVFSD AAGTRFQNLR YAVDRVAEVS GVRAMPHDLR RTFATVAESL
DVPAYAVKAL LNHKTTGDVT AGYIQMTPER LRGPMQRITD FMLAAGGLRD GADVVPLGAA
EARA