Gene TK90_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1183 
Symbol 
ID8806945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1258501 
End bp1259232 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID 
ProductCheW domain protein 
Protein accessionYP_003460428 
Protein GI289208362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.14971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATT CGCGTGATCA CAACCTGGCG CTCAAGGCGG AACCCGAAGC CCTGCATGAC 
TATTTCGGCA GCCTGCTGGA CGAACCGGCG CCGGTCGCCC CGGCGCACCT GCTGCGCCCG
GATATCCTCG AACCGAGACC AGCTCCCGCT GAACCGGAGC CTGCCGCCGT ACCCGACGTC
CCCGTGGTGG CCGAAGCGGT CGCGCCCCCG GCACCCCCGC GCACGATTGT CGAAAGTGAG
GAGTATCCGC GTCCGTCCGA GCGATTCTCC GCGCTGGTGC TGGAGGCCGG GAATCTGACT
CTGCTGGCGC CGCTAGCCTC GCTCGGCGGT GTTGCGCCGC TCGACGATCT GGAGGTGCGC
CCCACGCCCA ACCACTCTGT CTGGTATCTG GGCCTGGCGG ACACCAAACA AGGGCGGGTG
CAGTTGATTG ATCTCGCGGC CGTGGTAACG CCCGAAGACA GGGAGTACGA GCCGGAGACG
GCCCGCCACG TCGTGTTCCT GGCTGGGTCG CGCTTTGCGC TGGCCTGCCG CTCGATTCAG
GGGACCCGTG TGATAGAGCC CCAGAATCTG CGCTGGCGCA GCCATCGCAA GCGCCTGCCC
TGGCTGGCCG GGGTGGAGCG CGAACAGATG GCCACGTTGC TGGACCTGGA GGCCCTCGAC
CGGACCCTGG ACCAGGGTAG CTGGGAAATG GGCGGTGCTC CGGACTCAAG CCGCGACGAG
CGCGGCCGAT AA
 
Protein sequence
MNHSRDHNLA LKAEPEALHD YFGSLLDEPA PVAPAHLLRP DILEPRPAPA EPEPAAVPDV 
PVVAEAVAPP APPRTIVESE EYPRPSERFS ALVLEAGNLT LLAPLASLGG VAPLDDLEVR
PTPNHSVWYL GLADTKQGRV QLIDLAAVVT PEDREYEPET ARHVVFLAGS RFALACRSIQ
GTRVIEPQNL RWRSHRKRLP WLAGVEREQM ATLLDLEALD RTLDQGSWEM GGAPDSSRDE
RGR