| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1158 |
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| Symbol | |
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| ID | 8806920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1234220 |
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| End bp | 1235878 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_003460403 |
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| Protein GI | 289208337 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.622292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00313457 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGAGA ACGCACAATC CCTGCCGACC GTAATCACGG GCGGTATCCG CGAGTTCAAT
GGCATGCCGG CGGGGCGCCA GCTTGCGCTT CTGGGGATGC TCGCCGGCGC GATCGTGGTG
ATCGTGGCGG TACTGTACTG GGCCTTTCGG CCCACCTATG TGCCCCTGTT TCCGCGTATG
GAGAGCGAGG AAGCGGCAGA AGTGGTGCAG GCGCTTTCTC AGGCGGGAAT TTCGTACCAG
GTGGATGCCA CGACCGGACA GGTGAAGGTA CCCCAGGGCG ATGTAGCCGA GGCGCGTCTT
CAGCTGGCAT CGGAAGGCCT GCCGCGCTCG GGCGATGTGG GCTTCGAGTT GCTGCAGGAA
GACACTGGAC TGGGTACCAG CCGTATGGTC GAGGGGGCGC GTTTTCATCG TGCGATGGAA
GGGGAGCTGG CGCGCACCGT TGCGTCCCTG GACGCGGTCG AACGGGCGCG CGTGCATATT
GCGCAGGCCG AGCAGTCGGT GTTCGTACGC GATCGCCGGC CTGCCAGTGC CTCGGTGGTC
GTTCATCTGC GTGGAAGTCG ATCGCTTTCC GATTCGCAGG TGGCCGCGAT CGTGCATCTG
GTGGCCTCCA GCACCTCGGA GCTCGAGGCG GAGCGGGTGA CGGTGGTCGA TCAGCGTGGC
CGTCTGTTGA CGCAGGACGG CGCCGACCGC GGTGGCATGG CGAGCAGTGA TCGCCTGTCC
TTCTCGCGCG AGGTCGAGCA ACGTTATGCC GAACGGATCC ATGATCTGCT GGCCCCGATC
GTGGGTTCGG ACAAGGTGCG CGTCCAGGTC AATGCCGATA TCGATTTTTC GCAGGTGGAA
CGTACCGAGG AGCTCTACGA CCCGGAGACC ATCGCCTTGC GCTCGGAGCA GACGCGCGAA
GACGAGCGTA CGGGGATGGA CGGGGGCCCC GCTGGCGTCC CCGGTGCCCT GACGAATCAG
CCGCCGGAGG GTGGAGCGGT TGAAGACCCG GAAGGCGAGA TGGCCCCGGC CCCGTTGCCG
ACGAGCCGCA GCGCCAACGT TACGCGTAAC TATGAGGTCG ATCGACGCAT CAACCATATC
CGCGAGGCGC CGGGCGGTAT CCGCCGGGTG TCCACCGCGG TGGTGGTGGA CTTCCGTGAG
CAGGTGGGCG AGGACGGCGC CACCGAGAGC GTGGCGCGCG ATGCGGAGGA GCTGGAACGG
ATCGAAGCGC TGGTGCGGGA AGCGGTTGGA TTCTCGGAGG CCCGAGGCGA TACGCTGAAC
GTCGTGACGG CGCCCTTTGA GGCCCCGGCG GAGGAGATGA TCGAAGACGA GGTGCCGTTC
TGGTCTCAGT CGTGGTTCCT CGAGATGGTC AAGATCGGCG CAGGCCTGTT GCTGGCACTG
ATCCTGCTGC TGACGGTGGT GCGCCCGGCG CTCAAGCAGC TGATGGCGAG CCCGCCGCGT
GATCGGCGGG CCGACCAGCA AAGGGCGTTG ACGGACGAGT CGGACGACGA TAGTGCCGGT
GCGCCGGCGG GGTCGCAGTC GGCCGTGGCC GCACTGACGG GTCCCAAGGG GCCGGATCAG
CAGGAGATGG ATCTCGAGGC GGTACGCGAG ATGGTGCGCG AGGATCCGAA GCGCGTGGCA
CAGGTAATGA AGACCTGGTT GGGTGACGAT GGCCGTTGA
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| Protein sequence | MAENAQSLPT VITGGIREFN GMPAGRQLAL LGMLAGAIVV IVAVLYWAFR PTYVPLFPRM
ESEEAAEVVQ ALSQAGISYQ VDATTGQVKV PQGDVAEARL QLASEGLPRS GDVGFELLQE
DTGLGTSRMV EGARFHRAME GELARTVASL DAVERARVHI AQAEQSVFVR DRRPASASVV
VHLRGSRSLS DSQVAAIVHL VASSTSELEA ERVTVVDQRG RLLTQDGADR GGMASSDRLS
FSREVEQRYA ERIHDLLAPI VGSDKVRVQV NADIDFSQVE RTEELYDPET IALRSEQTRE
DERTGMDGGP AGVPGALTNQ PPEGGAVEDP EGEMAPAPLP TSRSANVTRN YEVDRRINHI
REAPGGIRRV STAVVVDFRE QVGEDGATES VARDAEELER IEALVREAVG FSEARGDTLN
VVTAPFEAPA EEMIEDEVPF WSQSWFLEMV KIGAGLLLAL ILLLTVVRPA LKQLMASPPR
DRRADQQRAL TDESDDDSAG APAGSQSAVA ALTGPKGPDQ QEMDLEAVRE MVREDPKRVA
QVMKTWLGDD GR
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