Gene TK90_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1157 
Symbol 
ID8806919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1233861 
End bp1234190 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content62% 
IMG OID 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_003460402 
Protein GI289208336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00163223 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAGA TGCAGATTCA GAACGTGCTG GCCCAGATGC GCCAACTGAC CCAGAGCTCG 
GGCGTGGAGG GGACCAATCC CGCACAGCAG CCGGGCAAGG TCGGCGGGGC GGAGTTCCAG
AACGTATTGC GCGACTCGCT GCGCGGGGTG AATGATGTTC AGCAGAGTGC GACCGATCTG
CAGACTCGCT TCGAGTTGGG CGACGAGAAC GTCAGCCTGC CCCAGGTCAT GGTGGCGATG
AACAAGTCGA GCATCGCGTT CGAGGCCACG AACCAGGTGC GCAACCGGCT CCTGAATGCG
TATCAGGAAA TCATGCGGAT GCAGGTCTGA
 
Protein sequence
MSEMQIQNVL AQMRQLTQSS GVEGTNPAQQ PGKVGGAEFQ NVLRDSLRGV NDVQQSATDL 
QTRFELGDEN VSLPQVMVAM NKSSIAFEAT NQVRNRLLNA YQEIMRMQV