Gene TK90_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1072 
Symbol 
ID8806831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1132175 
End bp1132999 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003460320 
Protein GI289208254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.433841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCT CGACCCTTCT CGGCATTATC GGCAGCCTGC TGGTTTTCGG CAGCGTGATC 
GCCTTTTCCT CGCAGGACCT GCATGCCTTC CTGAACCTGC CGGGGCTGGG CATCGTGCTC
GGCGGTACGA TCGCCGCGAC CCTGATGAGC TACCCCTTTC ACGAGGTGGT GCGCGTCTTC
CGTGCGGGGG CGCACGCCAT CCGCGAGGAG CGCTACGACA TCGCCCGCGA CCTGGAAGAG
ATCGTTCAGG TCTCGCGCTA CTGGTACTCG CAGAACCTGC GCGGCGTCCA GCAGCGCCTG
GAGCAGGTCC AGAATCCGTT CCTGCGCACC GGCATCCAGC TGGTGATCGA TGACACCCCG
ATGGACGACA TCCAGGACCT GCTCAACTGG CGCATGGCCC GCCTGCGCGC CCGCGAACAG
GCCGATGCGC AGATGTTTCG CACCATGGCC ACCTATGCCC CGGCCTTCGG CATGCTGGGG
ACACTGATTG GCCTGATCAA TCTGCTGCTG ACCACCGAGA CCGATGACTT CACCATCATC
GCGGTCAACC TCGGGATCGC CCTGATCACC ACGTTCTACG GCATCCTGCT GGCAAACCTC
GTGTTCCGCC CGATCGCGAT CAAGCTGGAA CGGCGCACCG AGGGCCGCGT CGTGCTGATG
ACCATGGTGC TCGAAGGCAT CATGCTGATG CGCAAGGGCC GCAGCCCGGG GTACATCCGC
GAGACCCTGC GTTCGTTCAT GGAGAACCAC CGCGACGAGA TCCGCCAGAC CGAGCCAAAC
GGCGAACCCG ATCCGGATGA AGCCGAACGC CAGGAACGCA CCTGA
 
Protein sequence
MNLSTLLGII GSLLVFGSVI AFSSQDLHAF LNLPGLGIVL GGTIAATLMS YPFHEVVRVF 
RAGAHAIREE RYDIARDLEE IVQVSRYWYS QNLRGVQQRL EQVQNPFLRT GIQLVIDDTP
MDDIQDLLNW RMARLRAREQ ADAQMFRTMA TYAPAFGMLG TLIGLINLLL TTETDDFTII
AVNLGIALIT TFYGILLANL VFRPIAIKLE RRTEGRVVLM TMVLEGIMLM RKGRSPGYIR
ETLRSFMENH RDEIRQTEPN GEPDPDEAER QERT