| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0546 |
|---|
| Symbol | |
|---|
| ID | 8806287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 580462 |
|---|
| End bp | 581298 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Rhodanese domain protein |
|---|
| Protein accession | YP_003459797 |
|---|
| Protein GI | 289207731 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.306524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTC GTTTCGCTCG CCCCCGAGTG GCCCTGGTGG CCCTGTGCCT GAGTCTGGCC
GGAGCCCCCA TCGTGGCCTC GGCCCAGCAA CCTTTTGTGG AATTCCCTGG CCGCCCGCTC
TATGAACGCT TTGGCGTCGA GGCGGTAGAT CTGTTCGATC TGCGCGGCCA GTTGTCGGGC
TCCACCGTGG TCGACGTTCG CCCCCGGCTC GAATACGACA TCCTGCATAT CGAGGGCGCT
CATCACGTCG ATCTCGACAG CGAAGACTTC GATCAGCAGA TCCTGGCGCT GGAAGAGGAA
CACGGCAGCC CGCTGGTGTT CTACTGCAAC GGTCGGCAGA GCTATGCCGG CTACCGTGCG
GCTGCCCGGG CCAACGAGCT TGGCGTGGCT GCGGCACAAG CTTACGATGC CGGCATGCAG
GACTGGGTCG AACGCTACCC AGGGCTGGCT CGTTTCCGTG GCGAGCCCGC CAACGAGGTC
GAGGACGAGT TGATCAGCGA GGACGCCTTC GAGGCGCGCG TGCTGGCGGC CGATGCGTTC
TCCCGGCGCG CCCGCCAGGG TGAGGATGTC GTCGTTGTGG ATATCCGCAG CCGCGGCGAA
CGCGACGAGA TCTCGCTGTT TGGCGGCCGC GAGGTCGGAG CGCCTCTGTC GGATATCAGT
GCCCTGGATC GCATCGTGGA TCAGGCCCGA CGCAACGAGC AGACCCTGTT GATCTTCGAC
CAGTATGGCC AGCAGGTCCG CTGGTTGCAG TATCACCTGG AAGAACTCGG AGTGGATGAC
TACTACTTCC TGGAGGGGGG GCTGCAGCGG TTCTATGACG AGGTCATGGC ACGCTGA
|
|---|
| Protein sequence | MIVRFARPRV ALVALCLSLA GAPIVASAQQ PFVEFPGRPL YERFGVEAVD LFDLRGQLSG
STVVDVRPRL EYDILHIEGA HHVDLDSEDF DQQILALEEE HGSPLVFYCN GRQSYAGYRA
AARANELGVA AAQAYDAGMQ DWVERYPGLA RFRGEPANEV EDELISEDAF EARVLAADAF
SRRARQGEDV VVVDIRSRGE RDEISLFGGR EVGAPLSDIS ALDRIVDQAR RNEQTLLIFD
QYGQQVRWLQ YHLEELGVDD YYFLEGGLQR FYDEVMAR
|
|---|
| |