| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0498 |
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| Symbol | |
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| ID | 8806238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 518929 |
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| End bp | 520512 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003459749 |
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| Protein GI | 289207683 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.112584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC CCCGCTCCCG ACTGCCGCTT GGCATTATCC TGGGCCTGGC GACCCTGCTG
GCCTCTGCCT GTAGCCTACA CGACTCCGAA CGCGCACTGG ATACCTCCCA GGTCGACAAG
CCTGTGGTGG AGGGGCCGAC CCAGGCCGAC GTCCAGGCCG CCATGGAGCG CCAGGCCCGC
GAGGCCGCCG ACCAGGCCGC GGAGACCGAC GACCTGTGGG AACGCACCCG CCTGGGGTTC
GGCTTTACCG ATGACCTGCA CCACGAGCGC GTGGAACAAT ACATCGAGCA TTACCGCGCC
AACCCGCGCA TCATCCAGCT CTCCACCGAG CGCGCCGAGC CGTTTGCGTA CTTCATCCTC
TCGGAGATCG AACAGCGCGA CATGCCGACC GAGCTGCTGT TGCTGCCGAT CGTGGAGAGT
GGCTTTGCCG CCGAAGCGAC CTCCAGCGGT CGTGCCGCCG GCATCTGGCA GTTCATCCCG
GCGACCGGCG ACCATTTCGA CCTGACGCGC GACCACTGGT ACGACGGGCG CCGCGATGTC
TACCAGTCCA CCCTCGCCGC GCTGGACTAC CTGGAGGCCC TGTATCAGCG CTTCGATGAC
TGGTACCTGG CCCTGGCCGC CTACAACTTC GGCCAGGGCA ACGTGACGCG GGCAATGGAG
CGCAACGCGG CGCGTGGGGA GCCGACCGAC TACTGGAGCC TCGAGCTCTC GGCCGAGGCG
ACCGCCTACG TGCCCCGTCT CCTGGCCCTG CGCGAGCTGT TTCTGGAGCC CGACGAACAC
GGGACACAGA TTACCCCGAT CGCCAATGAA CCGGCGCTGG AGCGGATCGA GCCCGGTCGC
CAGGCCGATC TCGCCTTGAT CGCCGAGATG ATCGGGCTCG AGGCGGATGA CCTGAAGCGC
CTGAATCCGG GCTATCAGCG CCACGCCACC CATCCGTCGC ATGCCCAGCA CCTGTTCATC
CCGCACGATG CGGCCGAGAC CCTGGAAGTC GCGCTGGCCG AACACGGCGA CGATCCGCTG
ATCCGCTTCC GCGAATACAC CGTGGCCCGG GGTGACAACC TCGGCTCCAT CGCCCAGCGG
GCCGGCACCC GCGTGGCCGT ACTGCGCGAA ATGAACGGTC TCAATGGCGA CAACATCCGC
GCCGGACAGA CACTGAAACT GCCGGTGACC GGACAGGAAG ACGCCGAGAT CCAGGTCGCG
GCCGCGGCCG AGTCGGGCGA ACTCGACACC TACGAGATCC AGGAAGGCGA CAGCCTGTGG
ACGATCAGCG AGCGTACGGG CATGACCATC AGCGAGCTGC GCGCGGCGAA CGAACTGGAG
CGCGATGCCA TCCTGCGTCC GGGCGATACG TTGCAGGTCA CCCAGGCGGG TTCAGGAAGT
TCTTCGGATA ACGGCCGCAG CGTCGCCTAC GAGGTGCAGC CCGGGGATTC CCTGTCCAGC
ATCGCCCGCC AATTCCAGGT CTCGGTCAGT GACCTGCGCC GCTGGAACTC GCTCAATGGC
GACGGCATCC GTGCGGGGGA AACCCTGACG CTCTACGTGG CCGAGGCCGA CGAAGAGGCC
ATTGCGCGGG CCCGCGACGC CTGA
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| Protein sequence | MIRPRSRLPL GIILGLATLL ASACSLHDSE RALDTSQVDK PVVEGPTQAD VQAAMERQAR
EAADQAAETD DLWERTRLGF GFTDDLHHER VEQYIEHYRA NPRIIQLSTE RAEPFAYFIL
SEIEQRDMPT ELLLLPIVES GFAAEATSSG RAAGIWQFIP ATGDHFDLTR DHWYDGRRDV
YQSTLAALDY LEALYQRFDD WYLALAAYNF GQGNVTRAME RNAARGEPTD YWSLELSAEA
TAYVPRLLAL RELFLEPDEH GTQITPIANE PALERIEPGR QADLALIAEM IGLEADDLKR
LNPGYQRHAT HPSHAQHLFI PHDAAETLEV ALAEHGDDPL IRFREYTVAR GDNLGSIAQR
AGTRVAVLRE MNGLNGDNIR AGQTLKLPVT GQEDAEIQVA AAAESGELDT YEIQEGDSLW
TISERTGMTI SELRAANELE RDAILRPGDT LQVTQAGSGS SSDNGRSVAY EVQPGDSLSS
IARQFQVSVS DLRRWNSLNG DGIRAGETLT LYVAEADEEA IARARDA
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