Gene TK90_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0393 
Symbol 
ID8806128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp411130 
End bp411918 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID 
Productphosphomethylpyrimidine kinase 
Protein accessionYP_003459644 
Protein GI289207578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.845054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.232819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATC CCCCGATCGC GCTGACCATT GCCGGCTCCG ACCCCGGCGG CGGTGCCGGT 
CTGCAGGCCG ACCTGACCAC CTTCACCCGC CTCGGCGTGC ACGGGGCCAC GGCCGTCACC
GCGATTACCG TGCAGGACAC CCGCAACGTA GTGGACTTCA CCGTACTCCC GCCGGAGCAG
CTGCGCGCCC AGATCGAGGT CACCCTGGCC GATCTCGAGG TGGCGGCGAT CAAGATCAGC
ATGCTCGGCT CGGTGGAGAA TGTGACCGTT ATCTCCGCGC TGCTGGGCGC GCACCCGCAC
ATCCCGGTGG TACTGGACCC GGTGATGGTC GCCGGCGGCG GCGGGGCGCT GGCGACCGAG
GCGGTCGTCG ACGCCACGCG CGAGGCCCTG CTGCCGCGGG CCACGCTGAT CACCCCGAAC
GGACCCGAGG CCGCGCGCCT GGCCCGCAGC GAGGACCCCG CGCAGTGGGG CCACCAGCTG
CGCCAGCTGG GCGCGCGCAA CGTGCTGGTC ACCGGAGGGC ACGAGGGCAC CGAACAGGAC
CCGATCATCA ATCGCCTCTA CCGCGAGGAC GACCACGTGC GCCCGTTCGA GCTGCCGCGC
CACCCGGCCG GCTTCCACGG CTCCGGCTGC ACCCTGGCAG CGGCGATCGC CGCCTTCCTT
GCCCGCGGCC GTGACATCGA ACCGGCCGTA ATCGAGGCCC AGGCCTTCAT GAACGATGCG
ATCGCCCGCG GCTATGCCCC CGGCCGCGGC CAGCACATCC CCAACCGCCT GTGCCCACAT
GACGACTGA
 
Protein sequence
MNHPPIALTI AGSDPGGGAG LQADLTTFTR LGVHGATAVT AITVQDTRNV VDFTVLPPEQ 
LRAQIEVTLA DLEVAAIKIS MLGSVENVTV ISALLGAHPH IPVVLDPVMV AGGGGALATE
AVVDATREAL LPRATLITPN GPEAARLARS EDPAQWGHQL RQLGARNVLV TGGHEGTEQD
PIINRLYRED DHVRPFELPR HPAGFHGSGC TLAAAIAAFL ARGRDIEPAV IEAQAFMNDA
IARGYAPGRG QHIPNRLCPH DD