| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0342 |
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| Symbol | |
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| ID | 8806073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 361365 |
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| End bp | 363113 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003459593 |
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| Protein GI | 289207527 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.351016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGGA GTAATCCGAT CGGACCCGAA ATGATTCGAC CCCTTTTTGT GGCACTGGCC
GCGCTCGTGC TGGTGGGCTG CGCCCACATG CCCCTGGGCG CCTCGGAGGG CGAGGCCCTG
GAGACGGATC GCCCCGTGAT CCTCCCGATC ATGCCGGCGC AGGACCCGGA AGCGGCCCTG
ATGCTGGGGG TGCTGGTCGG CGAGATCGCC GTGCGCTCCG GGCAGTACGA AGAGGCCGCG
CGCTACTACG GCGCCGCGGC CCTGCTCAGC GACGACCCGG CCATCGCCGA ACGGGCCACC
CGCATTGCGC TGTTCGCCCG GGATCGCAAC CAGGCCCTGC AGTCTTCCGA GCGCTGGCGC
CAGCTGGCAC CGGAGAGCCT GGATGCCCTG CAGTTGTCCA CGGTGCTGCG TCTGGACCTC
GGGCAGCCGG ATCCGGCTGC CGAGCAAATG GGAACGGTGA TCGACCTGCA GGCCGTGCAG
GGTGGAGACC CCTACGCGGC GCTTGGCGCG GTTGTCGGGC AGACACACAA CCGCGAGGCC
GCGCTGGAGG CCCTGGAAAA GCTGACGGAT CAGCGTCAGG ACGACGTTGG TGTGCATCGC
GTATTTGCCG AGGCGGCACT GCGCTTCGCG CCCGGCGATC CGGCACTGGA GGCGACCGCG
CGGGGTGTGG AGCGCTTCCC GGAATCCGTG TCTTTGCGGC TGCTGCGCGC CCGCGCCCTG
GACGAGGCGG GGCAGTCCGA CGAGGCGCTG GAGGAGCTGC GCGCGACGGT GGCCAACCAT
CCGGAGAGCC GCGAGGCCCG TTTTGGCTAT GCCCGTATGC TGGCGGAGCA CGATGATCGC
GAGATGGCGC GCGAAGAGAT GGACCGCCTG GTCGAGCAGG ACCCGGAGGA TGTGCAGCTG
CTGCTGGCCC TGGCACTGAT GAACCTCGAG GCCGAACAAC TGGGGCCGGC CCGGACCTAT
CTGGAGCGTC TGGACGCCCT GGGCGAGCGC GAGGACGACA TTGCCTACTA CCTGGGGCGG
CTGCACGAGA TGGAAGACGA CCCGGAAGGC GCGCGCCAGG CCTACGAGCG GGTCGGGGGT
GGCGGCCACG CCGATGATGC CCGCCTGCGC GCGGCGCGCA TGACGCTGGA GATCGAGGGC
GAGTCGGCCG CGCGCGAGCG CTTCGAGCAG ATGCAGCAGG GTCCGGATAC CGAGCTTGCC
CGACGTGCCT ATGTTGGCGA GGCGAACCTG CTGCGTGAAA AGGGCGAGTA CACGGCGGCG
CGCGAACGCC TGAATCGGGG ACTGGTGCAG TTCCCCGGCG ATACCCGGTT GCTGTACATG
CGCGGCCTGG TGCACGAGCG CCAGGATGAC ATCGAGGCCG CCGAGGCGGA TTTTCGCGCG
ATCCTGGACA ACGATCCGGA GAACGTCGCC GCGCTGAATG CGCTGGGCTA TACGCTGGCG
GACCGCACCG ACCGCTACGA GGAAGCGCTG GACCTGATCG AACGGGCCTA CGCGCAGGAG
CCCGACGACG CAGCGATCAT CGACAGCTAT GGCTGGGTCC TCTATCGCCT CGGGCGGCTG
GACGAGGCCG AGGACTTCCT GCGTCGCGCC TACGATCTCT CCGACGACGG CGAGATCGCG
AGCAACCTCG CCGTGGTGCT CTGGGAGCGG GGCGAACGCG ACGAGGCACG CTCCATTCTG
GAGGCGGCGC TGGAGCGCGA GCCGGATCAC GAGCGCCTGC TGCGGGTGCG TGACGAACTC
CTCGAGTGA
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| Protein sequence | MKWSNPIGPE MIRPLFVALA ALVLVGCAHM PLGASEGEAL ETDRPVILPI MPAQDPEAAL
MLGVLVGEIA VRSGQYEEAA RYYGAAALLS DDPAIAERAT RIALFARDRN QALQSSERWR
QLAPESLDAL QLSTVLRLDL GQPDPAAEQM GTVIDLQAVQ GGDPYAALGA VVGQTHNREA
ALEALEKLTD QRQDDVGVHR VFAEAALRFA PGDPALEATA RGVERFPESV SLRLLRARAL
DEAGQSDEAL EELRATVANH PESREARFGY ARMLAEHDDR EMAREEMDRL VEQDPEDVQL
LLALALMNLE AEQLGPARTY LERLDALGER EDDIAYYLGR LHEMEDDPEG ARQAYERVGG
GGHADDARLR AARMTLEIEG ESAARERFEQ MQQGPDTELA RRAYVGEANL LREKGEYTAA
RERLNRGLVQ FPGDTRLLYM RGLVHERQDD IEAAEADFRA ILDNDPENVA ALNALGYTLA
DRTDRYEEAL DLIERAYAQE PDDAAIIDSY GWVLYRLGRL DEAEDFLRRA YDLSDDGEIA
SNLAVVLWER GERDEARSIL EAALEREPDH ERLLRVRDEL LE
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