Gene TK90_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0299 
Symbol 
ID8806030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp316986 
End bp318023 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003459550 
Protein GI289207484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0978527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTC GCCCCCTTTC CTGGCTGGTG ATGGCCGCCG CGGCCGTGGC CGTCTCCATG 
CCCCTGGTCG GCTGCAGCCC GGCTGACGAA GACGAAGTCA ATCTCTACTC GGCGCGGCAG
GAGAACCTGA TCCAGCCCCT GCTCGAGCAA TTCACCGAGG AGACCGGCAT CAAGGTCAAC
CTGGTCACCG GCAGTGCCGA CAGCCTGCTG CAGCGCCTGC GTCACGAGGG GCGCAATTCG
CCCGCGGACG TGCTGATCAC CGTGGACGCC GGCCGCCTGC ACCACGCCCA GCAGGCGGGT
GTGCTGCAGG CTGTGGAATC CGACACGCTG AACGAGAACA TCCCAGAGCG CTATCGCGAC
CCCGAAGGCG AGTGGTACGG CCTGTCGCTG CGCGCGCGCC CAATCCTCTA TCACAAGGAC
CGGGTCGATC CGGATGACCT GTCCACCTAC GAGGCCCTGA CCGACGAGCA ATGGGAAGGC
CGCATCTGCA TCCGCTCGTC CGACAACGTC TACAACCAGT CGCTGGTGGC CGCGATGATC
GCGACCGAGG GCGCGGAGGC TGCCGAGGCC TGGGCCGAGG GCATCGTGAA CAACATGGCG
CGCCGGCCGC AGGGCGGCGA CCGCGACCAG ATTCGCGCAG TGGCCGACGG GGTTTGTGAT
GTTGCGATCG CCAACACCTA CTACCTGGGG CTGATGCTCG ACGGCGACGG CAGCGACCGC
GATGTCGCCG AACAGATCGG CGTCTTCTGG CCCAACCAGG ACGACCGCGG TACACACGTG
AACATTAGTG GTGCGGGCGT GACGGCGCAT GCCCCGAACC GCGACAACGC CATCCGCCTG
ATCGAGTACC TCACCTCGCA GGAGGCGCAA GAGTGGTACG CCGAGGCCAA CCAGGAATAT
CCGATCCGGG ATGATGTGCC GGCCAGCGAG ATCCTGCAGG GCTTTGGCGA GTTCAAGTCC
GACGACATCG AGCTGCACCT GCTGGGCGAC AACAACAGCG AGGCAGTGCG AATCATGGAC
CGCGTACGCT GGCGCTGA
 
Protein sequence
MSFRPLSWLV MAAAAVAVSM PLVGCSPADE DEVNLYSARQ ENLIQPLLEQ FTEETGIKVN 
LVTGSADSLL QRLRHEGRNS PADVLITVDA GRLHHAQQAG VLQAVESDTL NENIPERYRD
PEGEWYGLSL RARPILYHKD RVDPDDLSTY EALTDEQWEG RICIRSSDNV YNQSLVAAMI
ATEGAEAAEA WAEGIVNNMA RRPQGGDRDQ IRAVADGVCD VAIANTYYLG LMLDGDGSDR
DVAEQIGVFW PNQDDRGTHV NISGAGVTAH APNRDNAIRL IEYLTSQEAQ EWYAEANQEY
PIRDDVPASE ILQGFGEFKS DDIELHLLGD NNSEAVRIMD RVRWR