| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0266 |
|---|
| Symbol | |
|---|
| ID | 8805997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 279048 |
|---|
| End bp | 280898 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Sporulation domain protein |
|---|
| Protein accession | YP_003459517 |
|---|
| Protein GI | 289207451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.949989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.15172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCT CCGACCAATG CCTGAAACAG CTCGGCCTGC ATACGGCGCC GTTCGACGAG
ACGCCGGACG AACACTTCAT CTACAGCGAC CCGTTGCTGG ACGGGCTGCT GGAGTCGGCG
CGCGCCGCTC TCGATGCCCC GGGTGCCATC GTGATCATGA CCGGCGAAAA CGGCTCCGGG
CGCAGCCTGC AGTTGATGCG CCTGCTGGCC ATGCTGCCCG AGCCCTTCGA GCTGATCGCC
TTTCGCGCGC GCATCAACAC GCAGTTCGAA TCGGTGGACA ACACCATTCG CAACTACCTG
CGCTCGCACA ATGCCGATGA CCCGGATCGC CCCCTGACCG AACTGCTGGC CGAGCGGGTG
GCCCTCGGCC GCGATCCGGT GATCGCGATG GACGACGCCC ACCTCGTCGG CACCGACATC
GTGAACAACC TGATGCGCAT GCGCAGCGAG GTGCTCGAGT CCCAGGGCCG CGCGCCGCGC
GTGGTACTCG TGGGCTCCGG CGGCCTGCTC CGCCGCCGCC TGTACCTGCC CGATCCCTCC
GACGAGGACC AAGTCACAAG GGTCAATCTG CGGGCCTTCA ACCTCGAGCA GACCGGCGCC
TACCTGCGCC ACCGCCTGCA GGCGGCAGGC CTGGACGACC CCGATCGTCT GCTTGACCAG
GAGACCATCC ATCACCTGCA GACCACCAGC CAGGGCCTGC CCGGCAACCT GAACCGCGAG
GCCAACCAGA TCCTGGAGCG TCACTGCCGC AGCGAACGCC ATGCCGCCAG TGCAGCCGGC
ACTACAGCGC CCGGCATTGC GCTGGGTGAC GAGGCCGAAC GCGAAGAGGC GTCGTCACCC
ACGACACGCG AGCCAGCGGG CGTCACCATC GACTCCGATG CTGACCTCGA TCGCGAAAAC
GACGCCGAAC CCGTGCTTCG CGCCCAGCGC GAAGAGGACG AATTCACTCC GGCCGCCGAG
GCCCTCGCGC ACACGGACGC CGATGACGAA CCGGAGTGGC CACCGGAGCA CGAACTCGAC
GCCCCCCCAG AGGAAAAGCG CGCCGCGCCC TTCTGGAACC AGCGCTGGTT TGTGCCGGCG
GTGGCCGCCA CGGTCGCTAT CGGCATTGCC GCCCCCGTCG CCCTGCAGCT GATGGACGGT
GGCGATACCG AGGCGGAACA GGAGGTCGTC GAACTCCCGT TGCCCGAAAC CCGGCCCCCG
GCATCCCCCG ACCAGGACGA CCTGGTCGCG CCCGACCCGC TGGAGCATAC CGACGACACG
TTGACCAGCC CGGACATCGA ACCCCTGCCC GGCCAGGAAC GCCCGAGCGG CGATCCGATT
GCCGGCATTG AAGCCGAACC GGCCGCGGAA CCCGAGCCAC AGCCCGAGCC ACAGCCCGAG
CCACAGCCCG AGCCACAGCC CGAGCCACAG CCCGAGCCAG AACCCGCTCC GGAGCCTGAA
CCCGAGCCCG AACCAGCACC GGAGCCGGAG CCGGAGCCGG AGCCAGAACC GGAACCGGAA
CCGGAACCGG AGACGACGAC CGAGGCCCTG GCCGACGAGG ATGGCGACAG TGAGCGCCTG
CGCGGCGACC TGGAGTGGCT CGGCAGCCAG TCCTCCGATG CGTTCACCAT CCAGTTGATC
GCGGCCCCGG ACATGTCCAC TGCTCGCGGC TATGCGGATC GCCACAACCT TGGCGGCATC
CGCTACATCC CCACGCGGGT GAACAATCGC GACTTTGTGG TCGTGCTGGC TGGATCGTTT
GCCAGTCGCG AGGCCGCCGA AGGCGCGGCG TCGGACCTGC CCGAGGCGGT ACGCAACGAA
GGCCCCTGGA TCCGCTCCAT CGGCTCCGTG CAAGGCGTGG CACGCGAGTA G
|
|---|
| Protein sequence | MALSDQCLKQ LGLHTAPFDE TPDEHFIYSD PLLDGLLESA RAALDAPGAI VIMTGENGSG
RSLQLMRLLA MLPEPFELIA FRARINTQFE SVDNTIRNYL RSHNADDPDR PLTELLAERV
ALGRDPVIAM DDAHLVGTDI VNNLMRMRSE VLESQGRAPR VVLVGSGGLL RRRLYLPDPS
DEDQVTRVNL RAFNLEQTGA YLRHRLQAAG LDDPDRLLDQ ETIHHLQTTS QGLPGNLNRE
ANQILERHCR SERHAASAAG TTAPGIALGD EAEREEASSP TTREPAGVTI DSDADLDREN
DAEPVLRAQR EEDEFTPAAE ALAHTDADDE PEWPPEHELD APPEEKRAAP FWNQRWFVPA
VAATVAIGIA APVALQLMDG GDTEAEQEVV ELPLPETRPP ASPDQDDLVA PDPLEHTDDT
LTSPDIEPLP GQERPSGDPI AGIEAEPAAE PEPQPEPQPE PQPEPQPEPQ PEPEPAPEPE
PEPEPAPEPE PEPEPEPEPE PEPETTTEAL ADEDGDSERL RGDLEWLGSQ SSDAFTIQLI
AAPDMSTARG YADRHNLGGI RYIPTRVNNR DFVVVLAGSF ASREAAEGAA SDLPEAVRNE
GPWIRSIGSV QGVARE
|
|---|
| |