| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0218 |
|---|
| Symbol | |
|---|
| ID | 8805948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 226625 |
|---|
| End bp | 227497 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Tfp pilus assembly protein PilW-like protein |
|---|
| Protein accession | YP_003459469 |
|---|
| Protein GI | 289207403 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.829612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.145783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCA CCCGACTCCG TCCAGAGTGC TGCCTCCCCC GAATCCGTCC TAGCCGAGGC
TTCACATTAG TTGAACTGAT GATCGGAATC CTCGTCGGGA CGATCGTGGT AGCGGGTGTT
ATTGCTCTGT ACATCACCGT GATACGCGGC AGCGCCTTTG TCGTTACAGA AGCCCGGGTG
ACACAAGATA CACGAATTTC GATGGACCTC ATGGCTAGCG ACATCCGGCG AGCTGGCTAC
TCACATCCGA GCCGTATCGA GGTGTCAGAA GAAACCGGAA TGCCAGAAAA CCCATTCATG
GACGAAACCC GCAACATCAC CATTCATGAC CATGACGGCG GAACTGCAAA CTGCATCCTG
GTGAGCTACG ACCCGACTTT CCAGTACGCC CCTGAAGACG CATCTCTCGA GTTCGACCTT
TCGGACCTGA TAGGGTCCCG GCAGTTTGTC TTTGGCTACC GTCTTAACTC AGCAGGTGTT
ATCCAGATCC TGGCGTCATC TGATGTGACC ACCACCGAGA GCTGTGCAGA CGGCAGTTGG
GAAGCACTAA CCGATCCCAG AACAATTCGC GTCAACTCGC TGGTCTTCAG CACCGAAGGC
TCGACATGCC TCAATACATC ACTGGACCTT AGTAGCGACA GCGGAAACAC AGAAGACGAC
GCATTTTGGG AAGCGGAAGA AGAGAGCCGT AGCTTTTGCG AGCAGGCTTA CAACGGAGCC
CTCGAGCCCG ATCGGGACAA CGTACTGATC GAAAGCCGTC AGATCCGGGT CACCCTTGAA
GCTGCCGACC GATCCAGCGG AAACACGCAG GTAACCTTCG ACGAAAGTGT TCGCGTCCGA
AATAACCGAA TCTTCGCGGT GGAGGCCAAC TAA
|
|---|
| Protein sequence | MLTTRLRPEC CLPRIRPSRG FTLVELMIGI LVGTIVVAGV IALYITVIRG SAFVVTEARV
TQDTRISMDL MASDIRRAGY SHPSRIEVSE ETGMPENPFM DETRNITIHD HDGGTANCIL
VSYDPTFQYA PEDASLEFDL SDLIGSRQFV FGYRLNSAGV IQILASSDVT TTESCADGSW
EALTDPRTIR VNSLVFSTEG STCLNTSLDL SSDSGNTEDD AFWEAEEESR SFCEQAYNGA
LEPDRDNVLI ESRQIRVTLE AADRSSGNTQ VTFDESVRVR NNRIFAVEAN
|
|---|
| |