| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0197 |
|---|
| Symbol | |
|---|
| ID | 8805927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 206529 |
|---|
| End bp | 207149 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003459449 |
|---|
| Protein GI | 289207383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.994247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCC TGTTCGAAGC ACATGAACTG AAAACGGCCC ACCTGGGCCC GCTGGAACTG
CAACTCCAGC CGGGCGAGCT GGTGCAAGTC ACCGGTGCCT CCGGCTCCGG CAAGTCCCTG
CTGCTGCGCG CGCTGGCGGA CCTGGACCCG AACACCGGCG AGGTCCGTCT GGCTGGTGCG
CCCCGCGACT CGATGCCACC GGTGCAGTGG CGCCGGCAGG TTGCCTATGT ACCGGCCGAG
ACCGCCTGGT GGGACGAGCG CGTGGATGAT CATCTGCCCG CCGATTTCTC CCGCGAGACG
GTGCTGCACC TGCTGGAGCA GGTCGCCCTT CCGGAAGAGT CCCTGCACTG GGAGGTCGAG
CGCCTATCCA GCGGCGAGAA GCAGCGCCTG GGTCTTCTGC GGGCGCTGCT GAATCATCCA
CGCGTCCTCC TGCTGGACGA GCCCACGGCC AACCTCGACC TGGAGAACAC CAGGCGCATC
GAGCGCGCGG TACGCACATA CCTGGCGGAG GAAGAGGCGG CGGCCCTTTG GGTCAGCCAT
GACACGCTGC AACGCCAGCG TCTCGGTGGA CGCATCCTGA CCATCAGCAA CGGCAAGCTG
GAGGCCCCCG CATGGAGCTG A
|
|---|
| Protein sequence | MDRLFEAHEL KTAHLGPLEL QLQPGELVQV TGASGSGKSL LLRALADLDP NTGEVRLAGA
PRDSMPPVQW RRQVAYVPAE TAWWDERVDD HLPADFSRET VLHLLEQVAL PEESLHWEVE
RLSSGEKQRL GLLRALLNHP RVLLLDEPTA NLDLENTRRI ERAVRTYLAE EEAAALWVSH
DTLQRQRLGG RILTISNGKL EAPAWS
|
|---|
| |