| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4394 |
|---|
| Symbol | |
|---|
| ID | 8756088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4625951 |
|---|
| End bp | 4627477 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003411320 |
|---|
| Protein GI | 284992766 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGT TCGACACTGT CGACGTCCAG ACCACCCCTG AGATCGCCGA GGTCGAGGTG
CCCGCCGAGC CGAGCGGCCC GACCTTCGCC CAGCTGGGCC TGCCCCAGCA GCTGGTGACC
GCGCTCGAGC GGCGCGGCAT CCGGCACCCC TTCGCCATCC AGGCCTCCGC CCTGCCCGAC
GCCCTCGCCG GGCGCGACGT GCTGGGCAAG GCCGCCACCG GCTCGGGCAA GACGCTGGCC
TTCGGCCTGC CGATGCTCGC CCGCCTGGGC GAGACCGCCC GGCGGGGCCC GCGTGCCCCG
CGCGCGCTGG TGCTCGTGCC GACCCGCGAG CTGGCCCAGC AGGTGTTCGA CAACCTCGCA
CCCCTGGGCC AGTCGATCGG CGTCCAGCTG ACCACCGTCT ACGGCGGTGC CTCGATGTAC
CGGCAGATCC AGCAGCTGCG CCGTGGCGTG GACGCCGTCA TCGCCACCCC CGGCCGGCTG
CAGGACCTCA TCAGCCAGGG CGAGGTCACC CTCGACGAAG TCTCCGTGAC CGTCATCGAC
GAGGCCGACT TCATGTCCGA CCTGGGCTTC CTGCCGGTCG TGCAGGAGCT GCTCGACCAG
ACCCGCCCCG ACGCCCAGCG GCTGCTGTTC TCGGCCACGC TGGACGGCGA GGTGGACACC
CTGGTGCGCC GCTACCTGAA GGACCCGGCC CGGCACGAGG TCAAGCGCGC CGGGGACGAC
GCCCCGCCGG CCGAGCACCT GGCCTACAGC CTCGCCTTCC GGGACAAGGT GCCGGTGACC
GAGCAGCTGG CCGCCCGGCC GGGCCGCACG CTCATCTTCG TGCGCACCCA GCTCGGCGCC
GACCGGCTCG CCGGCAACCT GCAGGCCGCC GGCATCAAGG CCGAGGCAAT CCACGGCGGG
CTGCCGCAGG GCGCCCGCCG CCGGGCGCTG GAGGAGTTCA CCGACGCCCG CAGCCCGGTG
CTGGTCGCCA CCGACGTCGC CGCCCGCGGC ATCCACGTCG ACGACGTCTC GCTGGTGCTG
CACTACGACC CGCCGGCGGA CCACAAGACC TACCTGCACC GTTCGGGCCG CACCGCCCGC
GCCGGCGCCG GCGGCGTGGT CGTCTCGCTG CTGCTGCCCG ACCAGGTGGG CCAGGCCAAG
CGCCGGTTCC GCCAGGCCAA GATCGAGCCG GAGGTCTCCC GGGTCCGTCC GGGCGACGCC
CCGATCGCCG AGCTCATCGC CAGCGGCGTG CACGTCGAGC CGGTGGAGCG CCCGGTGCGC
GAGTCCCGGC GTCCCTCCGG TGGGCACGGC GGTCCCGGTG GCCGGCGTCC CCGCCGGGAC
GGCGAGCGTC CGCGCCGCGA CGGTGACCGG CCGCGCCGTC CCCACGGGGA GCGGCCGCGC
CGGGACGGCG ACCGTCCGGC GTTCGGCGAG CGGCCGTACG GCGAGCGTTC CCGCGGGAAC
GGCGACCGTC CGTACGGCGA GCGCGGCGAG CGTCGTCCCA GCCAGTACCG CGGTCAGGGC
CGGCGGCCCG AGCGGTCGGC GGACTGA
|
|---|
| Protein sequence | MTTFDTVDVQ TTPEIAEVEV PAEPSGPTFA QLGLPQQLVT ALERRGIRHP FAIQASALPD
ALAGRDVLGK AATGSGKTLA FGLPMLARLG ETARRGPRAP RALVLVPTRE LAQQVFDNLA
PLGQSIGVQL TTVYGGASMY RQIQQLRRGV DAVIATPGRL QDLISQGEVT LDEVSVTVID
EADFMSDLGF LPVVQELLDQ TRPDAQRLLF SATLDGEVDT LVRRYLKDPA RHEVKRAGDD
APPAEHLAYS LAFRDKVPVT EQLAARPGRT LIFVRTQLGA DRLAGNLQAA GIKAEAIHGG
LPQGARRRAL EEFTDARSPV LVATDVAARG IHVDDVSLVL HYDPPADHKT YLHRSGRTAR
AGAGGVVVSL LLPDQVGQAK RRFRQAKIEP EVSRVRPGDA PIAELIASGV HVEPVERPVR
ESRRPSGGHG GPGGRRPRRD GERPRRDGDR PRRPHGERPR RDGDRPAFGE RPYGERSRGN
GDRPYGERGE RRPSQYRGQG RRPERSAD
|
|---|
| |