Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_4296 |
Symbol | |
ID | 8755990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 4516631 |
End bp | 4517776 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | RpiR family transcriptional regulator |
Protein accession | YP_003411229 |
Protein GI | 284992675 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.846665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGC CGGAGCTGGC CGAGGAGGTC CTCGACGACC TCGACGTGCT GCGCGCCCGG GACCCGCGCG GCCTGCTGCC GGCGGTGGCC GGCGCCGGCG CGCAGGTCCG GGAGACCTCG CGGCTGACCG AGGAGGCCGG CCTCGAGCGG GTCACCACCG GCGGCCGCCC GCGCGGGCTG GTCATCGTGG CCCGCCGCGA GGGGGCGGTG GCCGCGCAGG TGCTGCGGGC GCTGCTCGGC CCGACCAGCC CGGTCACGGT GGACGTCGTC CCCGGGCCCG ACCTGCCGGT GTGGACCGGC CCCAGCGACA TCGCCGTCGT CGCCACCCGC ACCGGCGCCG GCCGCTACGC CGTCACCCCG GCCTACGAGG CGGCCCGGCG CGGCGTGACG CTGCTGGGCA TCGGCGCCGA GGACGCCCCG CTGCGTGCGG CCTGCTCCAC CGCCCGCGCG CCCTACGTCC CGCTGCCGCG CTCGCGGGTG CGGCACACGA CGCTCTGGTC GTTGCTCACC CCGATGGTGC AGCTGGCCGT CGGCCTGGAC CTGGTGTCCG AGAGCGCGGC CGACCTGGAG GCGGTCGCCG CGGCGCTCGA CGAGGTCGCC GCGGAGTGCG GGCCGGCCCG GGAGTCCTTC GTCAACCCGG CCAAGACGCT GGCCCTGGAG CTGCTCGACG CGCTGCCGGT GATCGCCGCC GAGGGGCCGC TGGCCGGCAC CGCCGCCACC CGCATCGCCG ACCAGCTCGC CACGCTGGCC GGCCTGCCGG TCACCACCTT CCGAATGCCG GACCAGCGGG TCGCCGCCTG CGCGGTGCTG CGCGGCCCGC TGGCGCCCGA GGGCGGCGAG GACGACTTCT TCCGCGACCG CGCCGAGGAC ACCGGCCGCC GGCTGCGGCT GCTCACGGTC CGCGACGCCG ACGCCGGCGA GCACGACGGC GCGGGCGAGC GTGAGCCCCG GTCGGCCCGC GAGGCGCTGT CCGAGGCGCT GCGCAGCGCA GCAGTGGCCA ACGTCCCGGT CAGTGCACTG GCCGAGCACG GGGACCCGGA GCGCTACGGG CGGCTGCCCC GCCTGGCCCG GCAGCTGGCG GTGGCCGACT TCACCGCCGT CTACCTGGCC CTGGCCCTGG ACGCCGAGAG GTCCGCCTCC GGATGA
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Protein sequence | MTPPELAEEV LDDLDVLRAR DPRGLLPAVA GAGAQVRETS RLTEEAGLER VTTGGRPRGL VIVARREGAV AAQVLRALLG PTSPVTVDVV PGPDLPVWTG PSDIAVVATR TGAGRYAVTP AYEAARRGVT LLGIGAEDAP LRAACSTARA PYVPLPRSRV RHTTLWSLLT PMVQLAVGLD LVSESAADLE AVAAALDEVA AECGPARESF VNPAKTLALE LLDALPVIAA EGPLAGTAAT RIADQLATLA GLPVTTFRMP DQRVAACAVL RGPLAPEGGE DDFFRDRAED TGRRLRLLTV RDADAGEHDG AGEREPRSAR EALSEALRSA AVANVPVSAL AEHGDPERYG RLPRLARQLA VADFTAVYLA LALDAERSAS G
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