| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4068 |
|---|
| Symbol | |
|---|
| ID | 8755759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4265609 |
|---|
| End bp | 4267210 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_003411004 |
|---|
| Protein GI | 284992450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.568841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGA CTGCGCCCGT CGTCCTGATC GCCGAGGAAC TAGCCCCCAG CGTGCTGGAG
GTACTGGGGC GCGACGTCGA GATCCGGCAC GTCGACGGCG CCGACCGCGC CGCCCTGCTG
CCGGCGCTGG CCGACGCTTC CGCGGTGATG ATCCGCAGCG CCACGCAGAT CGACGCCGAG
GCGCTGGCCG CCGCTCCGAA CCTCAAGGTG GTCGCCCGGG CCGGCATCGG CCTGGACAAC
GTCGACGTGC CCGCGGCCAC CGAGCGCGGC GTTCTGGTCG TCAACGCGCC GACGTCGAAC
ATCGTCAGCG CGGCCGAGCA CGCGGTGGCG CTGCTGCTGG CGGCCGCCCG GCACATCCCG
GCCGCCGACG CGTCGCTGCG CGAGGGCACC TGGAAGCGCT CGAAGTTCAC CGGCGTCGAG
GTGACCGACA AGGTCGTCGG CGTGGTCGGG CTGGGCCGGA TCGGCCAGCT GGTCGCCCAG
CGGCTGGCCG CCTTCGGCGT CACGCTGATC GCCTACGACC CCTACATCCA GCCGGGCCGG
GCCGCGCAGC TCGGCGTCCG CATGGTGTCG CTGGAGGAGC TGCTCCGCGA GGCGGACTTC
ATCACGATCC ACCTGCCCAA GACGCCGGAG ACCCTGGGCC TCATCGGCGT GGCCGAGCTG
GCCACCACCA AGCGCGGCGT GATCATCGTC AACGCCGCCC GTGGCGGGCT GGTCGACGAG
GCGGCGCTGG CCGAGGCGCT GGCGTCGGGC CAGGTCGGCG CCGCCGGCAT CGACGTCTAC
GCCACGGAGC CGTGCACCGA CAGCCCGCTG TTCGGGCTGG CCAACACCGT CGTCACCCCG
CACCTGGGCG CCTCGACGAC GGAGGCGCAG GACAAGGCCG GCACCGCGGT GGCGCACTCG
GTGCGGCTGG CGCTGCAGGG CGAGTTCGTG CCGGATGCGG TGAACGTCCA GGCCGGCGGG
GTCGTCGCCG AGGACGTCCG CCCCGGCCTG CCCCTGGCCG AGAAGCTCGG CCGCGTGTTC
ACCGCCGTCG CCGGCGGGCT GGCCCAGTCG GTCACCGTCG ACGTCCGCGG CAGGATCGCC
GAGTTCGACG ACTCGGTCCT GCAGCTCGCC GTCCTCAGGG GCGTCTTCTC CGAGGTCGTG
GCGGAGCAGG TCACCTACGT CAACGCCCCG CTGTTCGCCG ACCAGCGCGG CCTGGAGGTC
GCGCTCACCA CCGACGTGGA GAGCCCCGAC TACCGCAACC TGATCCGCGT CCGCGGCGCG
ATGTCCGACG GCACCGAGGT GACCGTCTCG GGCACCCTCT TCGGCAAGAA CCAGGTGCCC
AAGCTGGTCG AGGTCAACGG CTTCGACATG GACCTGGACG CAGCGGGCTA CCTGCTCTTC
TTCGTCTACA CCGACCGGCC CGGCGTCGTC GGCACGGTCG GCGCGGCACT GGGCGAGGCC
GGCATCAACA TCGCCGGCGC GCAGGTCAGC CGCACCACCC GCGGTGGCGA GGCGCTCATG
GCGGTGACCG TCGACAGCCC GGTTCCGGCC GAGCTGCTCG GCGACATCGC GGGCCGGATC
GGCGCGCGTG AGGCCCGCTC CGCGGACCTC ACCCCCCGCT GA
|
|---|
| Protein sequence | MTTTAPVVLI AEELAPSVLE VLGRDVEIRH VDGADRAALL PALADASAVM IRSATQIDAE
ALAAAPNLKV VARAGIGLDN VDVPAATERG VLVVNAPTSN IVSAAEHAVA LLLAAARHIP
AADASLREGT WKRSKFTGVE VTDKVVGVVG LGRIGQLVAQ RLAAFGVTLI AYDPYIQPGR
AAQLGVRMVS LEELLREADF ITIHLPKTPE TLGLIGVAEL ATTKRGVIIV NAARGGLVDE
AALAEALASG QVGAAGIDVY ATEPCTDSPL FGLANTVVTP HLGASTTEAQ DKAGTAVAHS
VRLALQGEFV PDAVNVQAGG VVAEDVRPGL PLAEKLGRVF TAVAGGLAQS VTVDVRGRIA
EFDDSVLQLA VLRGVFSEVV AEQVTYVNAP LFADQRGLEV ALTTDVESPD YRNLIRVRGA
MSDGTEVTVS GTLFGKNQVP KLVEVNGFDM DLDAAGYLLF FVYTDRPGVV GTVGAALGEA
GINIAGAQVS RTTRGGEALM AVTVDSPVPA ELLGDIAGRI GAREARSADL TPR
|
|---|
| |