| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3966 |
|---|
| Symbol | |
|---|
| ID | 8755654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4162013 |
|---|
| End bp | 4165009 |
|---|
| Gene Length | 2997 bp |
|---|
| Protein Length | 998 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_003410904 |
|---|
| Protein GI | 284992350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.602986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGGCA AAGCCCGCGT ACACGAACTC GCCAAGGAGT TCGGTGTCGA CAGCAAGACC
GTGCTCGCCA AGCTCAAGGA GCAGGGCGAG TTCGTGAAGT CCGCCTCCTC GACCGTCGAG
GCCCCCGTGG CCCGGCGGCT CCGGGAGGCA CTCGGCAGCA GCACCGGCAA CGGCGGCGGC
CAGGCGGCTC CCCGGCCCGG CCCGCGCCCG AGCGCACCCG CTGCCCCGCA GGCTCCGGTC
GCCGCGGCTC CGTCCGCGCC GCCCGTCCCT GCCGCTCCCG CCGCGCCGTC CGCGCCGGCT
CCCGCGCCGC AGCCGCCGGT GACCCGTGCC CCCGACGCGC CGACCCCGGG CCCGCGCCCG
GTCACGGCCC GTCCCGGTGC GCCCGTCCCC GGTCCACGAC CGACCGCGCC GGCACCGCAG
GCCCCTGCGG CCAGCGCGCC GACCCAGCAG CCGCCCGCGG CGCCCAGCGG CCCGCGTCCC
GCTGCCCCGC GTCCCGGTCC GGCCGGTGGC GCCACCCCGG GTGCGCGTCC GGCCGCCCCG
GCGCCCGGTC CCCGGCCGGG TCCGCGCCCG GCTCCGCGCC CGGGCAACAA CCCCTTCAGC
AGCGCCCCGC GCCCGGCTCC GTCCGGTGGT GCGCCGCGTC CCGGTCCCGC GGCCGGTGGC
CCGCGTCCGG GCCCGGCGGC CGGTGGGCCG CGTCCCGGGC CGTCCGGGCC CGGCGGTCCG
CGTCCGGGTC CCGGTGCCGG CGGTCCGCGT CCGGCGGCCG GTTCCCGTCC GGGTCCCGGC
GCCGGTGGTC CGCGTCCCGC GGCCGGTCCC GGCGGTCCGC GCCCGAACCC GGGCATGATG
CCGCAGCGTC CCTCGCCCGG CATGATGCCG CCGCGGCCGG CCGGTGGCGG TCGCCCTGGT
GCGCCGGCCG GTCGTGGCCG TCCCGGGGGT GGTCCCGGTG GCGGTGGCGG CGGCTTCCGC
CCCAGTGGCG GCGGTGGCGG TGGCGGTGGC GGCGGTGCCG GTGCTCCCGC CGGCGGTGGC
TTCCGCAGCG GCGGCGGCGG TGGCCGCGGT CGGGGCCGTG GTGGCTCGGG TGCGGGTACC
GCGGGTGCCT TCGGTCGTCC CGGCGGGCGT GGCCCGGTCC GTGGGCGCAA GAGCAAGAAG
CAGCGGCGTC AGGAGTTCGA CTCCATGGCG GCGCCCAGCA TGGGCGGCGT CAGCCTGCCG
CGCGGCAACG GGCAGACCGT CCGGCTGCCC CGTGGCGCCT CGCTGACCGA CCTCGCCGAG
AAGATCGGCG CGCAGCCGGC CGCGCTCGTC ACCGCCCTGT TCCACCTGGG CGAGATGGTC
ACCGCGACCC AGTCGGTCAA CGACGAGACG CTCCAGCTGC TCGGTGCCGA GATCGACTGG
GACATCCAGG TCGTCAGCCC CGAGGACGAG GACCGCGAGC TGCTCGAGAC CTTCGACCTC
ACCTTCGGTG ACGAGGGCGA CGAGGAGGAC TGGGAGGCCC GTCCGCCGGT GGTGACCGTC
ATGGGTCACG TCGACCACGG CAAGACCAAG CTGCTGGACG CCATCCGCAA CACCAACGTG
GTGGCACGGG AGGCCGGCGG CATCACCCAG CACATCGGCG CCTACCAGAT CGTCACCAAG
CTGGAGGACG ACGAGCGGCC GATCACCTTC ATCGACACCC CGGGTCACGA GTCGTTCACC
GCGATGCGTG CCCGCGGCGC GAAGGTCACC GACATCGTCG TCCTGGTCGT GGCGGCCGAC
GACGGCGTCA TGCCGCAGAC GGTCGAGGCG CTCAACCACG CCCAGGCCGC CGAGGTGCCG
ATCGTGGTCG CGGTCAACAA GATCGACAAG GAGGGGGCCA ACCCCGCCAA GATCCGTCAG
CAGCTCACCG AGTACGGGCT GGTGGCCGAG GAGTACGGCG GCGACACGAT GTTCGTCGAC
GTCTCCGCGA CGACCCGCCA GGGCATCGAC GAGCTCCTGA CGGCGATCCT GCTGACCGCC
GACGCCTCGC TGGACCTGCG CGCGAACACC GAGCAGGACC CGCAGGGCGT GGTCATCGAG
GGCAAGCTGG ACAAGGGCCG CGGCCCCGTC GCCACGGTGC TCGTCCAGCG CGGCACGCTG
CGCCAGGGCG ACTCGATCGT GGCCGGCGAC GCCTACGGTC GCGTCCGGTC GCTGCTCGAC
GAGCACGGCA ACAAGCTGAA GGAGGCCCTG CCGGCCCGCC CCGTGCAGGT CGTGGGTCTC
ACCTCGGTGC CCCGTGCCGG CGACACCTTC CTGGTCGTCG AGGAGGACCG GGTGGCGCGG
CAGATCGCCG ACCGTCGCCA GGCCCGCATC CGCAACGCGC AGAACGCCTC CATGCGCAAG
CGGATTAGCC TCGAGGACCT CGACGCGGCG CTCAAGGAGA ACCGTCAGCT CAACCTGATC
ATCAAGGGCG ACAACTCGGG CACCGTCGAG GCGCTCGAAG AGGCGCTGAT GAAGATCGAG
GTGAGCGACG ACATCTCGCT GCGGGTCATC CACCGCGGCG TCGGCGGCAT CACCAAGAGC
GACATCGACC TCGCGCTGGC CGACGACGTC ATCGTCCTGG GCTTCAACGT CCGGGCCGAG
GGCCAGGCCA CCGAGCTCGC CAACCGCGAG GGCGTCGACG TCCGGTACTA CTCGGTCATC
TACCAGGCGA TCGAGGAGAT CGAGGCGGCC CTCAAGGGCA TGCTCAAGCC GGAGTACGAG
GAGGTCGCGC TCGGTACGGC GGAGGTCCGC GAGGTCTTCC GGGTGCCGCG GATCGGCAAC
GTCGCGGGCT CCATCGTCCG CAGCGGGACG ATCACCCGGA ACTCGAAGGC CCGGCTGGTC
CGCGACGGGG TGGTCGTCGC CGACAACCTC ACCGTCGAGT CGCTGCGTCG CTTCAAGGAC
GACGTGACCG AGGTCCGCGA CGGCTACGAG TGCGGTATCG GTCTCGGATC GTTCAACGAC
ATCAAGGTCG AGGACGTCAT CGAGACCTTC GAGATGCGCG AGAAGCCGCG CGTGTGA
|
|---|
| Protein sequence | MPGKARVHEL AKEFGVDSKT VLAKLKEQGE FVKSASSTVE APVARRLREA LGSSTGNGGG
QAAPRPGPRP SAPAAPQAPV AAAPSAPPVP AAPAAPSAPA PAPQPPVTRA PDAPTPGPRP
VTARPGAPVP GPRPTAPAPQ APAASAPTQQ PPAAPSGPRP AAPRPGPAGG ATPGARPAAP
APGPRPGPRP APRPGNNPFS SAPRPAPSGG APRPGPAAGG PRPGPAAGGP RPGPSGPGGP
RPGPGAGGPR PAAGSRPGPG AGGPRPAAGP GGPRPNPGMM PQRPSPGMMP PRPAGGGRPG
APAGRGRPGG GPGGGGGGFR PSGGGGGGGG GGAGAPAGGG FRSGGGGGRG RGRGGSGAGT
AGAFGRPGGR GPVRGRKSKK QRRQEFDSMA APSMGGVSLP RGNGQTVRLP RGASLTDLAE
KIGAQPAALV TALFHLGEMV TATQSVNDET LQLLGAEIDW DIQVVSPEDE DRELLETFDL
TFGDEGDEED WEARPPVVTV MGHVDHGKTK LLDAIRNTNV VAREAGGITQ HIGAYQIVTK
LEDDERPITF IDTPGHESFT AMRARGAKVT DIVVLVVAAD DGVMPQTVEA LNHAQAAEVP
IVVAVNKIDK EGANPAKIRQ QLTEYGLVAE EYGGDTMFVD VSATTRQGID ELLTAILLTA
DASLDLRANT EQDPQGVVIE GKLDKGRGPV ATVLVQRGTL RQGDSIVAGD AYGRVRSLLD
EHGNKLKEAL PARPVQVVGL TSVPRAGDTF LVVEEDRVAR QIADRRQARI RNAQNASMRK
RISLEDLDAA LKENRQLNLI IKGDNSGTVE ALEEALMKIE VSDDISLRVI HRGVGGITKS
DIDLALADDV IVLGFNVRAE GQATELANRE GVDVRYYSVI YQAIEEIEAA LKGMLKPEYE
EVALGTAEVR EVFRVPRIGN VAGSIVRSGT ITRNSKARLV RDGVVVADNL TVESLRRFKD
DVTEVRDGYE CGIGLGSFND IKVEDVIETF EMREKPRV
|
|---|
| |