Gene Gobs_3942 details

Gene Information

• Locus tag: Gobs_3942
• ID: 8755627
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 4134412
• End bp: 4135077
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 78%
• Product: putative transmembrane anti-sigma factor
• Protein accession: YP_003410881
• Protein GI: 284992327

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.248924
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGAGC GGGGAGAGCA CCGGGGACTG CGTGAGCAGC TGGGCTGGTA CGCCCTCGGG 
CACGGGACGC CGGAGGAGCG GGCCGGCGTC CGCGCGCACC TGGACGGGTG CGCCTCCTGC 
CGTGCGGAGC TCGCCGAGCT GGCGCCGCTC GCCGCACGGC TGGAGGGCGT GGACCCCGAC 
CGGCTCGACG AGCAGCCGGC GCCCCCGGCC GGCCTCGGCG AGGCGGTGCT GGCCCGGATC 
GCGGCCGAGG AGCCGCTGCG CCGGCGGCGG ACGTCATCCC GCCGGGCGCT GGCCGCGGCC 
GCCGTCGTGG GCGTGGCCGC GGCGGGCTTC GGGATCGGCT GGCTGGCCCG CCCGGTGCCG 
GACCCGCTAC CGCTCGAGCC GGTCGCGGTG CAGGTCGCGG ACAGCGGCAT CCAGGCCACC 
GCCGACGTCG TCCCGCACAC GTGGGGCGTG GAGGTCAAGC TGACCGGCGA GGGCTTCACC 
GCCGGCGCGG TCTACCGAGT CGTGGTCACC GACGAGGACG GCACCGCGGT CCCCGCCGGC 
CAGTTCCTCG GCGTGGGGCC CGCGGAGCTG CGCTGCAACC TCAACTCCTC GGTTCTGCGG 
GAGGACGCCA CCGGTTTCCA GGTCGTGGCC GCCGACGGCA CCGTGGTGGC GAGCTCGGAG 
CTGTGA 

 

Protein sequence

MTERGEHRGL REQLGWYALG HGTPEERAGV RAHLDGCASC RAELAELAPL AARLEGVDPD 
RLDEQPAPPA GLGEAVLARI AAEEPLRRRR TSSRRALAAA AVVGVAAAGF GIGWLARPVP 
DPLPLEPVAV QVADSGIQAT ADVVPHTWGV EVKLTGEGFT AGAVYRVVVT DEDGTAVPAG 
QFLGVGPAEL RCNLNSSVLR EDATGFQVVA ADGTVVASSE L