Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3860 |
Symbol | |
ID | 8755545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 4047783 |
End bp | 4049786 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | alpha amylase catalytic region |
Protein accession | YP_003410803 |
Protein GI | 284992249 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCGAAC AGCGGCCCGA TACTGACGCC GTGACGATCC CGGCGACCGC CCGTCGAGCT GCGGCGGAAC AGGCGTGGAC GCAGCTGCGG CCGGAGCTGG AGGCCGAGGC GGTCGCCGCG CTCGGCCCGG CGGAGGGCGA CGCCTTCCTC GCCCGCGCCG ACCTCGCGCT CTACGACGTC CACGAGCCGC TGGCCACCCT CTACGCGGAG GCCGCCGACG AGCTCTTCGC CCGCGCGCTG CGCAGCGCAC TGGCCGCCGC CGTCGAGCGC CCGGAGGCCC TGCGGCGCAT CGACCGGCGC CGGGAGGTCG ACCCGGGGTG GTTCCAACGG TCCCGGGTGC AGGGCTACGT CTGCTACGTC GACCGGTTCT GCGGCACCCT CGACCGGCTC CCCGGCCGGC TGGACCACCT GGCCGAGCTC GGTACGACCT ACCTGCACCT CATGCCGCTG CTGCGGCCGC GGCCGGGGGA GAACGACGGC GGTTACGCGG TGCTGGACTA CCGCGCGGTC GACCCGCGGC TGGGCACGAT GAGCGACCTC GAGGACGTCG CCGGCGCACT GCACGACCGC GGCATGGCGC TGTGCATCGA CCTGGTGCTC AACCACACCG CCCGGGAGCA CGCCTGGGCG CAGGGCTGGC TGGCCGGCGA CCCGGCCTAC GCCGGCTTCT ACACCGCCTT CCCCGACCGC ACGCTGCCCG ACGCCTACGA CGCGACGATC CCCGAGGTCT TCCCCGACCG GGCGCCGGGC TCGTTCAGCT GGGTACCGGA GGCCTGCGGC GGCGCCGGCG GCTGGGTGTG GACGACGTTC TGGCCGTACC AGTGGGACCT GGACTACTCG AACCCCGAGG TCACCCTGGC GATGCTCGGG GAGATCACCT GGCTGGCCAA CCGCGGCGTC GACGTGTTCC GCATGGACGC CGTCCCGTTC ATGTGGAAGC GGCTGGGCAC CAGCTGCCAG AACCAGCCCG AGGGCCACAG CCTGCTGCAG CTGCTGCACG CGCTGACCCG GCTGGCCGCC CCCGGCGTCA TCTTCAAGGC GGAGGCGATC GTCTCGCCCG ACGACCTGGT GGGGTACCTC GGCGGGCACG ACCGCTACCG GCCCGAGTGC GAGCTGGCCT ACCACAACCA GCTCATGGTG CTGCTGTGGA GCAGCCTGGC CACCCAGGAC GTGCGGCTGG CCCGGCAGGC GCTGCGCCGG ATGCGGCCGG TGCCGCCGAC CGCCACCTGG TGCACCTACG TGCGCGGCCA CGACGACATC GGATGGGCGG TCGCCGACGA GGACGCCGCA GCGGTGGGCC TCGACGGCTT CGCCCACCGC CGCTTCCTCA ACGACTTCTA CTCCGGCCGC TTCCCGGGCT CCTTCGCCCG CGGCGCGCTG TTCCAGGAGA ACGAGGTCAC CGGCGACGCG CGGGTCTCCG GCTCGGCGGC GTCGCTGTGC GGCATCGAGG CCGCGCTCGA GGCGGGCGAC GACGCCGCGC TGGACGCCGG GGTCCGCCGG CTGGTGCTGC TGTACTCGGT CGCCTACGCG TACGGCGGCA TCCCGCTGCT CTACATGGGC GACGAGCTGG CGCTGCGCAA CGACTCGGGC TACCTGGCCG ACCCCGCGCT GGCCCCGGAC AACCGCTGGA TGCACCGCCC GCCGATGGAC TGGGAGGCCG CCGCCCGCCG GAGCGACCCG GCGACCCTCG AGGGCCGGGT GTGGCGGGAG CTCCACCGGC TGGGCGAGGT GCGCCGCGCG CAGTTGGCGC TGCGCGGCGG GGTGGAGTCC ACAGTGGTGG ACGCCGGCAG CGACGCGGTC CTGGTGTGGC GGCGCAAGCA CCCGCGCAGC GGCACCTTCG TCGGGCTGGC GAACTTCTCG GCGTTCCCGC AGGCGGTGGA CGCCGACACC GTCACCGGCT TCGGCGGCTT CGAGCAGGTG CACGGCAGCG ACGGCGTCCT CCCGGTGCGG GAGGGGCAGG TCGTCGTCCC GGGCCTCGGC TTCGCCTGGT TCGCCGAGCC GTGA
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Protein sequence | MGEQRPDTDA VTIPATARRA AAEQAWTQLR PELEAEAVAA LGPAEGDAFL ARADLALYDV HEPLATLYAE AADELFARAL RSALAAAVER PEALRRIDRR REVDPGWFQR SRVQGYVCYV DRFCGTLDRL PGRLDHLAEL GTTYLHLMPL LRPRPGENDG GYAVLDYRAV DPRLGTMSDL EDVAGALHDR GMALCIDLVL NHTAREHAWA QGWLAGDPAY AGFYTAFPDR TLPDAYDATI PEVFPDRAPG SFSWVPEACG GAGGWVWTTF WPYQWDLDYS NPEVTLAMLG EITWLANRGV DVFRMDAVPF MWKRLGTSCQ NQPEGHSLLQ LLHALTRLAA PGVIFKAEAI VSPDDLVGYL GGHDRYRPEC ELAYHNQLMV LLWSSLATQD VRLARQALRR MRPVPPTATW CTYVRGHDDI GWAVADEDAA AVGLDGFAHR RFLNDFYSGR FPGSFARGAL FQENEVTGDA RVSGSAASLC GIEAALEAGD DAALDAGVRR LVLLYSVAYA YGGIPLLYMG DELALRNDSG YLADPALAPD NRWMHRPPMD WEAAARRSDP ATLEGRVWRE LHRLGEVRRA QLALRGGVES TVVDAGSDAV LVWRRKHPRS GTFVGLANFS AFPQAVDADT VTGFGGFEQV HGSDGVLPVR EGQVVVPGLG FAWFAEP
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