Gene Gobs_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_3860 
Symbol 
ID8755545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp4047783 
End bp4049786 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content75% 
IMG OID 
Productalpha amylase catalytic region 
Protein accessionYP_003410803 
Protein GI284992249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCGAAC AGCGGCCCGA TACTGACGCC GTGACGATCC CGGCGACCGC CCGTCGAGCT 
GCGGCGGAAC AGGCGTGGAC GCAGCTGCGG CCGGAGCTGG AGGCCGAGGC GGTCGCCGCG
CTCGGCCCGG CGGAGGGCGA CGCCTTCCTC GCCCGCGCCG ACCTCGCGCT CTACGACGTC
CACGAGCCGC TGGCCACCCT CTACGCGGAG GCCGCCGACG AGCTCTTCGC CCGCGCGCTG
CGCAGCGCAC TGGCCGCCGC CGTCGAGCGC CCGGAGGCCC TGCGGCGCAT CGACCGGCGC
CGGGAGGTCG ACCCGGGGTG GTTCCAACGG TCCCGGGTGC AGGGCTACGT CTGCTACGTC
GACCGGTTCT GCGGCACCCT CGACCGGCTC CCCGGCCGGC TGGACCACCT GGCCGAGCTC
GGTACGACCT ACCTGCACCT CATGCCGCTG CTGCGGCCGC GGCCGGGGGA GAACGACGGC
GGTTACGCGG TGCTGGACTA CCGCGCGGTC GACCCGCGGC TGGGCACGAT GAGCGACCTC
GAGGACGTCG CCGGCGCACT GCACGACCGC GGCATGGCGC TGTGCATCGA CCTGGTGCTC
AACCACACCG CCCGGGAGCA CGCCTGGGCG CAGGGCTGGC TGGCCGGCGA CCCGGCCTAC
GCCGGCTTCT ACACCGCCTT CCCCGACCGC ACGCTGCCCG ACGCCTACGA CGCGACGATC
CCCGAGGTCT TCCCCGACCG GGCGCCGGGC TCGTTCAGCT GGGTACCGGA GGCCTGCGGC
GGCGCCGGCG GCTGGGTGTG GACGACGTTC TGGCCGTACC AGTGGGACCT GGACTACTCG
AACCCCGAGG TCACCCTGGC GATGCTCGGG GAGATCACCT GGCTGGCCAA CCGCGGCGTC
GACGTGTTCC GCATGGACGC CGTCCCGTTC ATGTGGAAGC GGCTGGGCAC CAGCTGCCAG
AACCAGCCCG AGGGCCACAG CCTGCTGCAG CTGCTGCACG CGCTGACCCG GCTGGCCGCC
CCCGGCGTCA TCTTCAAGGC GGAGGCGATC GTCTCGCCCG ACGACCTGGT GGGGTACCTC
GGCGGGCACG ACCGCTACCG GCCCGAGTGC GAGCTGGCCT ACCACAACCA GCTCATGGTG
CTGCTGTGGA GCAGCCTGGC CACCCAGGAC GTGCGGCTGG CCCGGCAGGC GCTGCGCCGG
ATGCGGCCGG TGCCGCCGAC CGCCACCTGG TGCACCTACG TGCGCGGCCA CGACGACATC
GGATGGGCGG TCGCCGACGA GGACGCCGCA GCGGTGGGCC TCGACGGCTT CGCCCACCGC
CGCTTCCTCA ACGACTTCTA CTCCGGCCGC TTCCCGGGCT CCTTCGCCCG CGGCGCGCTG
TTCCAGGAGA ACGAGGTCAC CGGCGACGCG CGGGTCTCCG GCTCGGCGGC GTCGCTGTGC
GGCATCGAGG CCGCGCTCGA GGCGGGCGAC GACGCCGCGC TGGACGCCGG GGTCCGCCGG
CTGGTGCTGC TGTACTCGGT CGCCTACGCG TACGGCGGCA TCCCGCTGCT CTACATGGGC
GACGAGCTGG CGCTGCGCAA CGACTCGGGC TACCTGGCCG ACCCCGCGCT GGCCCCGGAC
AACCGCTGGA TGCACCGCCC GCCGATGGAC TGGGAGGCCG CCGCCCGCCG GAGCGACCCG
GCGACCCTCG AGGGCCGGGT GTGGCGGGAG CTCCACCGGC TGGGCGAGGT GCGCCGCGCG
CAGTTGGCGC TGCGCGGCGG GGTGGAGTCC ACAGTGGTGG ACGCCGGCAG CGACGCGGTC
CTGGTGTGGC GGCGCAAGCA CCCGCGCAGC GGCACCTTCG TCGGGCTGGC GAACTTCTCG
GCGTTCCCGC AGGCGGTGGA CGCCGACACC GTCACCGGCT TCGGCGGCTT CGAGCAGGTG
CACGGCAGCG ACGGCGTCCT CCCGGTGCGG GAGGGGCAGG TCGTCGTCCC GGGCCTCGGC
TTCGCCTGGT TCGCCGAGCC GTGA
 
Protein sequence
MGEQRPDTDA VTIPATARRA AAEQAWTQLR PELEAEAVAA LGPAEGDAFL ARADLALYDV 
HEPLATLYAE AADELFARAL RSALAAAVER PEALRRIDRR REVDPGWFQR SRVQGYVCYV
DRFCGTLDRL PGRLDHLAEL GTTYLHLMPL LRPRPGENDG GYAVLDYRAV DPRLGTMSDL
EDVAGALHDR GMALCIDLVL NHTAREHAWA QGWLAGDPAY AGFYTAFPDR TLPDAYDATI
PEVFPDRAPG SFSWVPEACG GAGGWVWTTF WPYQWDLDYS NPEVTLAMLG EITWLANRGV
DVFRMDAVPF MWKRLGTSCQ NQPEGHSLLQ LLHALTRLAA PGVIFKAEAI VSPDDLVGYL
GGHDRYRPEC ELAYHNQLMV LLWSSLATQD VRLARQALRR MRPVPPTATW CTYVRGHDDI
GWAVADEDAA AVGLDGFAHR RFLNDFYSGR FPGSFARGAL FQENEVTGDA RVSGSAASLC
GIEAALEAGD DAALDAGVRR LVLLYSVAYA YGGIPLLYMG DELALRNDSG YLADPALAPD
NRWMHRPPMD WEAAARRSDP ATLEGRVWRE LHRLGEVRRA QLALRGGVES TVVDAGSDAV
LVWRRKHPRS GTFVGLANFS AFPQAVDADT VTGFGGFEQV HGSDGVLPVR EGQVVVPGLG
FAWFAEP