Gene Gobs_3155 details

Gene Information

• Locus tag: Gobs_3155
• ID: 8754831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: -
• Start bp: 3309401
• End bp: 3310204
• Gene Length: 804 bp
• Protein Length: 267 aa
• Translation table: 11
• GC content: 77%
• Product: shikimate-5-dehydrogenase
• Protein accession: YP_003410132
• Protein GI: 284991578

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGGCAG CCGTCCTCGG CCGCCCGGTG GGCCACTCCC TGTCCCCGCT GCTGCACCGG 
GCCGCCTACG CGGCGCTGGG CCTCGACGAC TGGACCTACG ACGCCCTCGA CGTCGGGCCT 
GCGGACCTGC CGGTGCTGCT GGCCGGGCTC GGCGAGGAGT GGCGCGGCTT CTCGGTGACG 
ATGCCGTGCA AGCAGGCGGC GGTGGACGTC GCCGACGTGG TGGAGCCGTT GCCGCGCCTG 
CTCCATGCGG CCAACACGCT GGTGCGCACC CAGGCGGGCT GGCGGGCGGA GAACACCGAC 
GTCCTCGGGG CCGGCACCGC CCTCCAGCAG GCCGGGGTCA CCGAGGTGAC CCGCGGCGCG 
ATCGTCGGCG CCGGGGGCAC GGCGGCGGCC GCGGCGGTCG CGCTCGCCTC GCTGGGCGCC 
GAGCACGTCG ACGTCGTCGT CCGCGAGCCG GCCCGCGCCG TCGACCTGCT GCGGGTGCTC 
GACACCCTCG GCGTCCCGAC CACGGTGGTG TCGCTGAACT CGGCCGTCGT GGAGGCCGAC 
GTCGTGGTGA GCACCGTGCC GGTCGGCGGC CAGGAGGCCG TGGCCGCCCT GCCCTGGACG 
GCGGACCAGA CGGTGCTCGA CGTCCTGTAC GACCCGTGGC CGACGCCGCT GGCCACCGCC 
GTCACCGCGG CCGGCGGCTC CGTGGTCGGC GGCCTGGAGA TGCTGTTCTG GCAGGCCACC 
GCGCAGGTGG AGCTCATGAC CGGGCAGCCC GCGCCGCTGG TGGCGATGCG CGGCGCGCTC 
GACGCCGCCG TCGGTCCCCG CTGA 

 

Protein sequence

MRAAVLGRPV GHSLSPLLHR AAYAALGLDD WTYDALDVGP ADLPVLLAGL GEEWRGFSVT 
MPCKQAAVDV ADVVEPLPRL LHAANTLVRT QAGWRAENTD VLGAGTALQQ AGVTEVTRGA 
IVGAGGTAAA AAVALASLGA EHVDVVVREP ARAVDLLRVL DTLGVPTTVV SLNSAVVEAD 
VVVSTVPVGG QEAVAALPWT ADQTVLDVLY DPWPTPLATA VTAAGGSVVG GLEMLFWQAT 
AQVELMTGQP APLVAMRGAL DAAVGPR