Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_2989 |
Symbol | |
ID | 8754662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3124428 |
End bp | 3125270 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | pseudouridine synthase |
Protein accession | YP_003409970 |
Protein GI | 284991416 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.340471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCG CCCCGCACGA CGACAGCACC CCCGGCCCCG CCGAGGGGTG GTCGGAGGAC ATGGAGCTCG CCCCCGCGCA CCCCGGGGAC CGCGGCCGCA GTGGCACCGA CGCGTCGGCG GAGGGGGAGC GGCTGCAGAA GGTCCTCGCC CGCGCCGGGG TCGGCTCGCG CCGCGTCGTG GAGAACATGG TCGACCAGGG CCGGATCAGC GTGAACGGCA AGACGGTCGC CGTGCAGGGC ATGCGGGTCG ACCCCGAGCG CGACAAGATC GCCGTCGACG GCGTCCGCAT CGAGCTGCGC GACGACCGCG TCACCTACGC GCTGAACAAG CCGCCGGGCG TCATCACCGC GATGAGCGAC GACCGGAACC GGCCGACCGT CGGGGACATG GTCGGCGACC TGGCGCCCGG CCTGGTGCAC GTCGGCCGGC TGGACCAGGA CACCGAGGGC CTGCTGCTGG TCACCAACGA CGGCGAGCTG GCCCACCGCC TCGCGCACCC CTCCTACGAG GTCAAGAAGA CCTACCTGGC GCAGGTGTCG GGCTCGGTCC CGCGCGACAT GGCCCGCCGG CTGCGCTCCG GGGTGGAGCT GGAGGACGGC CCGGTGAAGG TCGACTCGTT CCGGGTGGTC GACACCCACG CCGGGCAGTC GGTCGTCGAG GTCGTGCTGC ACGAGGGCCG CAAGCACATC GTCCGGCGGC TGCTGGCCTC CGTCGGGCTG CCGGTGTCCC GGCTGACCCG CACCGCCGTC GGCCCGGTCA AGCTCGAGCG CATGCGCAGC GGGTCGATCC GCCGGCTCTC CCGCGCCGAG GTCGGTGCGC TGGAGGAGGC CGTCGGCCTC TAG
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Protein sequence | MDTAPHDDST PGPAEGWSED MELAPAHPGD RGRSGTDASA EGERLQKVLA RAGVGSRRVV ENMVDQGRIS VNGKTVAVQG MRVDPERDKI AVDGVRIELR DDRVTYALNK PPGVITAMSD DRNRPTVGDM VGDLAPGLVH VGRLDQDTEG LLLVTNDGEL AHRLAHPSYE VKKTYLAQVS GSVPRDMARR LRSGVELEDG PVKVDSFRVV DTHAGQSVVE VVLHEGRKHI VRRLLASVGL PVSRLTRTAV GPVKLERMRS GSIRRLSRAE VGALEEAVGL
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