| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2125 |
|---|
| Symbol | |
|---|
| ID | 8753796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 2209731 |
|---|
| End bp | 2211398 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Catalase |
|---|
| Protein accession | YP_003409181 |
|---|
| Protein GI | 284990627 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.935253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG TCGCATCGCA GGGCCCTGCT CCGAGTGAGG CCGGCCGTCC GGTCCTGACC
AACCGTCAGG GTCACCCGGT TTACGACAAC CAGAACCAGC GGACAGTGGG CGCCCGCGGC
CCGGCGACGC TGGAGAACTA CCAGTTCCTC GAGAAGATCA GCCACTTCGA CCGGGAGCGC
ATCCCGGAGC GCGTGGTGCA CGCGCGCGGC TTCGTGGCCT ACGGCGAGTT CGAGGCCACC
GGCAAGTGGG GCGACGAGCC CATCGAGCGC TACACCCGCG CCAAGCTCTT CAACGCCCCC
GGCAAGAAGA CCGATCTCGC CATCCGCTTC TCCAGCGTCA TCGGCGGCCG GGACTCCTCC
GAGGCGGCGC GCGACCCGCG CGGCTTCGCG GTGAAGTTCT ACACCGAAGA CGGCAACTGG
GACATCGTCG GCAACAACCT CGCGGTTTTC TTCATCCGTG ACGCCATCAA GTTCCCCGAC
GTCATCCACT CCCTCAAGCC GGACCCCATC ACCTTCCGGC AGGAGCCGGC CCGGATCTTC
GACTTCATGT CGCAGACCCC CGAGGCCATG CACATGCTGG TCAACCTGTT CTCCCCGCGC
GGCATCCCGT CGGACTACCG GCACATGCAG GGCTTCGGCG TGAACACCTA CAAGTGGGTC
AACGCCCAGG GTGAGACCGT CCTGGTGAAG TACCACTGGA TCCCCAAGCA GGGCGTCAAG
AGCCTGACGG CGGCCGACGC CGCGGCGATC CAGGCCAACG ACCTGGGTCA CGCCTCCAAG
GACCTCTACG AGGCCATCGA GCGCGGCGAC TTCCCCCAGT GGGACCTCTA CGTCCAGATG
ATGAGCGACG ACGAGCACCC CGAGCTGGAC TTCGACCCGC TGGACGACAC GAAGGTCTGG
CCGGAGAACG AGTTCGAGCC CAAGCTCGTC GGCACGATGA CGCTGAACCG CAACATCACC
GACCACCACA ACGAGAACGA GCAGAGCGCG TTCGGCACCG GTGTGCTGGT CGACGGTCTC
GACTTCTCCG ACGACAAGAT GCTGGTCGGC CGCACCTTCT CCTACAGCGA CACCCAGCGT
TACCGGGTGG GCCCGAACTA CCTGCAGCTG CCGATCAACT CGGCGAAGGG CGCCCGCGTC
GCGACCAACC AGCGCGGCGG CCAGATGTCC TACGGTGTCG ACCTCGGTGA GGGTCAGAAC
CCGCACGTCA ACTACGAGCC CTCGGTCATG GGCGGCCTGC GCGAGGCGCA GTACCCCACC
CACGACGAGC AGGGGCCGGT CGTCACCGGG CGGCTCACCC GCAAGCGCAT CCCCCGGACC
AACGACTACA CCCAGGCCGG GCAGCGCTAC CAGCTCATGG AGCAGTGGGA GAAGGACGAC
CTGGTGAAGA ACCTGGTCGA CAACATCGGT GAGGCGGTCC GCGAGGTCCA GGAGCGGATG
GTCTGGCACT TCTTCATGTG CGACGACGAG CTCGGCCAGC GGGTCGGCGA GGGGCTGGGC
ATCACCGCGG ACGACGTCCG TGGCCTGGAG CCGCTGCAGA CCCAGACGCT GTCGGAGGAG
GAGCTGCAGC GCGCGGCCAA CCTCGGCAAG AACGGTCCGC GTGACGTCAC CGGCCTGAAG
ATGACGCACA CCGTGCCCAA CGAGCGGGTC GTGCTCGCCC AGGGCTGA
|
|---|
| Protein sequence | MTDVASQGPA PSEAGRPVLT NRQGHPVYDN QNQRTVGARG PATLENYQFL EKISHFDRER
IPERVVHARG FVAYGEFEAT GKWGDEPIER YTRAKLFNAP GKKTDLAIRF SSVIGGRDSS
EAARDPRGFA VKFYTEDGNW DIVGNNLAVF FIRDAIKFPD VIHSLKPDPI TFRQEPARIF
DFMSQTPEAM HMLVNLFSPR GIPSDYRHMQ GFGVNTYKWV NAQGETVLVK YHWIPKQGVK
SLTAADAAAI QANDLGHASK DLYEAIERGD FPQWDLYVQM MSDDEHPELD FDPLDDTKVW
PENEFEPKLV GTMTLNRNIT DHHNENEQSA FGTGVLVDGL DFSDDKMLVG RTFSYSDTQR
YRVGPNYLQL PINSAKGARV ATNQRGGQMS YGVDLGEGQN PHVNYEPSVM GGLREAQYPT
HDEQGPVVTG RLTRKRIPRT NDYTQAGQRY QLMEQWEKDD LVKNLVDNIG EAVREVQERM
VWHFFMCDDE LGQRVGEGLG ITADDVRGLE PLQTQTLSEE ELQRAANLGK NGPRDVTGLK
MTHTVPNERV VLAQG
|
|---|
| |