| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1879 |
|---|
| Symbol | |
|---|
| ID | 8753550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1951416 |
|---|
| End bp | 1952738 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | deoxyribonuclease/rho motif-related TRAM |
|---|
| Protein accession | YP_003408953 |
|---|
| Protein GI | 284990399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.160336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC GGCGGCCCCG CCGGCGTCCG GCTGCCCCCA CGCACCCGGA CCGGGGCGGC
GGCTGGGCCG GCCGGGAGTT CGAGGTCACC GTGGGACCGG TGGCGCACGG CGGGCACTGC
GTGGCCCGGC ACGAGGGCCG GGTCGTGTTC GTGCGGCACA CGCTGCCCGG CGAGCGGGTC
GTCGTCCGGG TCACCGAGGA CCGCCAGCCG GGCTTCTGCC GCGCCGACGC CGTCGAGGTG
CTCGAGGCCG CTCCCGACCG GGTGCCGCGG CCCTGTCCGT ACAGCGGCCC GGGGCGCTGC
GGCGGCTGCG ACTGGCAGCA CGTCGCGCAC GAGGGGCAGC TGCGGCTCAA GGCCGAGGTG
GTCCGCGAGC AGCTGACCCG CCTGGCCGGG CTGACCGCCG AGGACCCGGT CGTGCGGGAC
CTGACCGTCG AGGCCCTGCC CGGCGGGCCG CTGCGCTGGC GCACCCGCGC GCGCTTCGCC
GTCGACCGCG CCGGGGCGCC GGGGCTGCGC CGGCACCGCT CGCACGACCT GGTGCTGCTC
GAGGACTGCC CGATCACCGT GGAGCCGGCC GCGCGCGCCG TCCTCGACCG CCGCTGGCCC
GGCGCCGGCG CGGTGGACGT CGCCGTCGAC TCCGCCGGCA CGGTGACCAC CACCCGGCTC
GACCGCGGAG GCCGCCCGCA GTCGACGCAG GTGCTGCGTG CCGGCGAGGA CGGGGGCGGG
TGGGACGACG CCAGGGAGCC GGCCCGACGG GCCGCGCGCT GGGCCGCCGG ACGCGACTGG
GAGGTCGAGG GCACCGGCTT CTGGCAGGTG CACCCCGCCG CGGCCGACGC GCTCACCGGG
ACCGTGGCCG GGTACGCCGC CGTCCGGGCG GGGGAGACGG TGCTCGACCT CTACGCCGGG
GCCGGGTTGT TCGGCGGCGC GCTCGCCCCC GCCGTGGGGT CCGCGGGCCG GGTGGTCTGC
GTGGAGGCCG ACGAGGCCGC CTGCGCCGCC GCCCAGGCCA ACCTCGCCGC GCTGACGCAG
GCGGAGGTCT GGCAGGGCGA GGTGGACGCC GAGGGGCTCA TCGGACTCCT CGCGGAGCTG
GACGCGGAGC CGGACGTCAT CGTCCTCGAC CCACCCCGGG CCGGTGCCGG GACGGCGGTG
AGCCGGGTGC TCGCCGCGGC CGGGCCGCGC GCGGTCGTCT ACGTCGCCTG CGACCCGGCG
TCACTGGCGC GCGACGTCGC CGCCTTCGCC GCGGGCGGCT ACCGGCTGTC CGGACTGCGC
GGCTTCGACG CCTTCCCGAT GACCGCGCAC GTGGAGTGCG TCGCGCTGCT CGAGCCTGCC
TGA
|
|---|
| Protein sequence | MAERRPRRRP AAPTHPDRGG GWAGREFEVT VGPVAHGGHC VARHEGRVVF VRHTLPGERV
VVRVTEDRQP GFCRADAVEV LEAAPDRVPR PCPYSGPGRC GGCDWQHVAH EGQLRLKAEV
VREQLTRLAG LTAEDPVVRD LTVEALPGGP LRWRTRARFA VDRAGAPGLR RHRSHDLVLL
EDCPITVEPA ARAVLDRRWP GAGAVDVAVD SAGTVTTTRL DRGGRPQSTQ VLRAGEDGGG
WDDAREPARR AARWAAGRDW EVEGTGFWQV HPAAADALTG TVAGYAAVRA GETVLDLYAG
AGLFGGALAP AVGSAGRVVC VEADEAACAA AQANLAALTQ AEVWQGEVDA EGLIGLLAEL
DAEPDVIVLD PPRAGAGTAV SRVLAAAGPR AVVYVACDPA SLARDVAAFA AGGYRLSGLR
GFDAFPMTAH VECVALLEPA
|
|---|
| |