Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1210 |
Symbol | |
ID | 8752872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1273153 |
End bp | 1274010 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | Type II secretion system F domain protein |
Protein accession | YP_003408328 |
Protein GI | 284989774 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGGCG CGCTGCTCGG ACTGCTGCTC GGCGTCGGCC TGCTGCTCGT CTGGCGCAGC GGCCCGCGCG CCCCGCAGCG CCGGGACCGC TCCCGCACGC CGTCGCGGCG GCAGCAGCAC CTGGCCGCGG CCGGCCTCAC CGGCATCAAC GCCGCCCAGT TGACCGCCCT GCAGGTGGGG CTCGGCCTGC TCGCCACGGT CGTCGTCCTG CTCACCACCG GCACGGTCAC CGTCAGCCTG CTGTTCGGCG CCTTCGCCGC GGCGCTGCCC GTCGTGCAGG TGCGCCGGCT GGCGGTCAAG CGACGGGCAG ACCTGCGCGA GGTGTGGCCG GAGGTCGTGG ACAACCTTGC CTCCGCCGTC CGGGCCGGAC TGTCGCTGCC CGAGGCGCTG TCGGCGCTGT CGACCCGCGG GCCGGAGGTG CTGCGGCCGC CGTTCGCCCG TTTCGCCGCG GAGTACCGCT CCAGCGGCCG GTTCGGCAAC GGCCTCGACC GGCTCAAGGA CGACCTGGCC GACCCGGTCG GGGACCGGAT CGTCGAGACG CTGCGGGTGG CCCGCGAGGT CGGCGGCAGC GACCTGGGCC GGGTGCTGCG GACCCTCTCG TCGTTCCTGC GCGAGGACGC CCGCGCCCGC GCGGAGCTGG AGACCCGGCA GGGCTGGGTG GTGCAGGCCG CGCGGCTGGC CGTCGCCGCG CCGTGGGTGG TGCTGCTCCT GCTGGCCACC CAGTCGGCGA CGCTGGAGGC CTACGACTCC CCGTTGGGGA CGGCGATCCT GCTCGGCGGC GCGGCAGTCT GCCTGGCTTC CTACCGGCTG ATGCTGCGGA TCGGCCGGCT GCCGCAGGAC GTGCGGGTGC TCCAGTGA
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Protein sequence | MTGALLGLLL GVGLLLVWRS GPRAPQRRDR SRTPSRRQQH LAAAGLTGIN AAQLTALQVG LGLLATVVVL LTTGTVTVSL LFGAFAAALP VVQVRRLAVK RRADLREVWP EVVDNLASAV RAGLSLPEAL SALSTRGPEV LRPPFARFAA EYRSSGRFGN GLDRLKDDLA DPVGDRIVET LRVAREVGGS DLGRVLRTLS SFLREDARAR AELETRQGWV VQAARLAVAA PWVVLLLLAT QSATLEAYDS PLGTAILLGG AAVCLASYRL MLRIGRLPQD VRVLQ
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