| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1163 |
|---|
| Symbol | |
|---|
| ID | 8752824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 1226549 |
|---|
| End bp | 1227454 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | cell wall hydrolase/autolysin |
|---|
| Protein accession | YP_003408288 |
|---|
| Protein GI | 284989734 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.914132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACCG AACGACCGGG CCACTGCCGC GGCTGCGCAC CTCGGGGTCA CCGGAGGTCG
GCCACAGCCT TGTCAGCTGT GAGAGGCGCC GCCTTCGCAG TGGCGCTGAG CGTGATTGGC
TCGGCTACCG CCTGCACAAT CCCGACAAGT GCGTCGAGTG CCTCGACCGG GACGACGACA
CAAACTACGT CGCAGGTCTC CTCACCTCCG TTCGCGGCCC CGCTCTCAGC CGGGCTGCCT
GCTGTCGTCG TTCTGGATCC GGGGCACAAT GGCGGCAATG CTGCTGCTCC GGCTGATATT
AGCCGGCCCG TCCCGGCAGG TGGCTTCACC AAGCCGTGCA ACACCGTTGG TGCACAGACG
AGCGCCGGAT ACCCCGAGCA CGCGTTCGCG TTCGATGTGG CGCATCGGGC AGCGGACCTG
CTCCGCGCCA AGGGCGTGAC CGTGGCCCTG ACCCGCACCG ATGACTCGGG AGTGGGCCCC
TGCGTGAACG AGCGCGCCGA CGCAGCCAAC GAGGCCGGCG CCGCTTTGGC GGTTTCCATC
CATGCGGACG GCGCCGACCC GGACGTTCGG GGCTTCCATG TGATCAAACC TGCTTTGGCA
CCTGATGGTG GCAACGCCGG CATCTTGGAG CCTTCGGAGC AAGCAGCGTT CCACATGCTG
ACGGCCTTCA GCGCGGCGAC TGCTGAACCA ATGGCCACCT ACCCGGGAGA GCTTGTGCAG
CCCGGACTCA CTCGACGTAA CGATCTCGCC GGACTTAACC TAGCACGCGT TCCGGCAATC
TTTATCGAGT GCGGAAACAT GCGCAACCAC GAGGATGGAA CAGTTGTTAC CGACCCGGAC
TGGCGTCAAC GAGCCGCGCA GGGGATTGCC AACGGCGTGC TGATGTTCTT AGCCTCACGT
CCATGA
|
|---|
| Protein sequence | MVTERPGHCR GCAPRGHRRS ATALSAVRGA AFAVALSVIG SATACTIPTS ASSASTGTTT
QTTSQVSSPP FAAPLSAGLP AVVVLDPGHN GGNAAAPADI SRPVPAGGFT KPCNTVGAQT
SAGYPEHAFA FDVAHRAADL LRAKGVTVAL TRTDDSGVGP CVNERADAAN EAGAALAVSI
HADGADPDVR GFHVIKPALA PDGGNAGILE PSEQAAFHML TAFSAATAEP MATYPGELVQ
PGLTRRNDLA GLNLARVPAI FIECGNMRNH EDGTVVTDPD WRQRAAQGIA NGVLMFLASR
P
|
|---|
| |