Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1028 |
Symbol | |
ID | 8752689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1086804 |
End bp | 1087631 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC-2 type transporter |
Protein accession | YP_003408160 |
Protein GI | 284989606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.321996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCG TCCTGACCCC TGCTGCCACC CGGCCGGCAC CGCCGCCGGC CCTGACCATC GGGCTGGCCC GGACGGCGCT GGAGCTGCGG CTGTTCGTCC GCGACCCGGC CCAGGTGGTG TTCTCCTTCG CGTACCCGAT CGTGATGCTG GTGATCTTCG CGTCGGTCTT CGCCGGCGAG GACCGGCCGG GCGGGGTGCC GTTCGCGCAG TACTTCCTCG CCGGGATCGC GGCCACCGGG ATCATGCTGA CCAGCTTCCA GGCGGTGGGG ACGGCGCTGG CCGAGGAGCG CGAGCGCGGC GACCTGGTCC GGCTGCAGGT GATCGGCACG CCGCCGCTGG GCTACTTCCT CGGCAAGGCC GGTCAGGTGC TGGGAACGAC GGTGCTGCAG CTCGCGGTCC TGCTCACCGT GGCGGCGACC GCCTACGACG TGCCGATGCC GGACGGGGCC GGCCGGTGGC TGACCTTCGC CTGGGTGGCG CTCGGCGGCG CGCTGGCGGG CACCGTCCTC GGCATCGCGG TCGCCTCGGT GGGCAGCAGC CGTGCGGTGG GCAACGGGAT CAGCGCGTTC GCCATCGTGC TGCAGTTCTT CTCCGGGGTC TTCTTCGTCT TCTCCGAGCT GCCCTCGTGG ATGCAGGAGG TGGCTGCGGT CTTCCCGCTG AAGTGGCTGG TGCAGGGCAT GCGCTCGGTG TTCCTGCCCG ACGCCGCGGC CGCCGCGGAG CCCGCGGGCA GCTGGGAGCA CGGCATGATC GCCCTCGTGC TCGCGGTGTG GGTGGTTGTC GGCCTCGCGG TCTGCAGCCG CACGTTCCGC TGGCGCCGGG CGGCATGA
|
Protein sequence | MTAVLTPAAT RPAPPPALTI GLARTALELR LFVRDPAQVV FSFAYPIVML VIFASVFAGE DRPGGVPFAQ YFLAGIAATG IMLTSFQAVG TALAEERERG DLVRLQVIGT PPLGYFLGKA GQVLGTTVLQ LAVLLTVAAT AYDVPMPDGA GRWLTFAWVA LGGALAGTVL GIAVASVGSS RAVGNGISAF AIVLQFFSGV FFVFSELPSW MQEVAAVFPL KWLVQGMRSV FLPDAAAAAE PAGSWEHGMI ALVLAVWVVV GLAVCSRTFR WRRAA
|
| |