Gene Htur_5227 details

Gene Information

• Locus tag: Htur_5227
• ID: 8745775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013747
• Strand: +
• Start bp: 123027
• End bp: 123704
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 646515584
• Product: cytochrome c biogenesis protein transmembrane region
• Protein accession: YP_003406531
• Protein GI: 284176254
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0785] Cytochrome c biogenesis protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCCCG ACGCGTCGCT GCTCACGCCG ATCGCCTTCG CGCTGACCGC CGGGATCGCG 
ACGTTCTTCT CGCCGTGTTC GTACCCTCTC TTGCCGGGCT ACGTCGGGTT CTACGTGAGT 
CAGACGGAGG ACGACGAGGC CTCCCTTTCC GGTGCGCTCG GTCGCGGTCT CGTCGCCGGA 
GTCGGTGTCC TCGGGACGTT CGCTGCGCTT CTGGTCGCCG CCTACTGGAT CGGCCACTCG 
AGGCTCTCGG GGATCGTCCT CTTCGAACCG ATCGTCGGCG CGATCCTGAT CGCGTTCGGC 
GCGTTGATCG TCCTCGATCG GGCGCCCTCG CTTTCGGTGG CGTTACCCAA ACGCCGCTCG 
AGCGTGCTCG GGTTCGCGGT CTTCGGCGCG GGCTACGCGC TGGCAGCGGC GGGCTGTGTG 
GCGCCGCTGT TTATCGGCGT CGTCGCGCAG GCGCTCTCGC TTCCGCCGTT CGAGGCGGCG 
CTCATCGTCG GCACCTACAT CGGCAGCGTC GTCGTGTTGA TGGTCTCGCT GACCGTCGCG 
ACGGGAATGG GACTGGTCGC GGGCGCCGGT CGACTGGCCG CCCACAGTCG GCTCCTCGAG 
CGACTCGCGG GCGTCGTCAT GATCGTCGCC GGAGTCGGCC AGCTGTACCT CGCCGTCGTT 
GTCCTCGACG TCATCTGA 

 

Protein sequence

MIPDASLLTP IAFALTAGIA TFFSPCSYPL LPGYVGFYVS QTEDDEASLS GALGRGLVAG 
VGVLGTFAAL LVAAYWIGHS RLSGIVLFEP IVGAILIAFG ALIVLDRAPS LSVALPKRRS 
SVLGFAVFGA GYALAAAGCV APLFIGVVAQ ALSLPPFEAA LIVGTYIGSV VVLMVSLTVA 
TGMGLVAGAG RLAAHSRLLE RLAGVVMIVA GVGQLYLAVV VLDVI