| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_5133 |
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| Symbol | |
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| ID | 8745681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013747 |
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| Strand | + |
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| Start bp | 29250 |
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| End bp | 30128 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646515490 |
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| Product | shikimate kinase |
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| Protein accession | YP_003406437 |
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| Protein GI | 284176160 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGG ACGGCCGCGC CGTCGCCCCA GCAGCCGGAA CGGTTCTCAA CGCGCTTGCG
ACCGGGACCG GCTCGGCGTT TGCGATCGAC CTCGAGACGA CAGCTACCGT CGAACTCACC
GATGACGGCG AGATCGACGC CGAAATCACC GGGCAGCCCG ACGCCGACAC GACGCTCATC
AAGCGCTGCG TCGCGATGAC GCTCGCCGAG CACGCCGACG CGGCGGGCCT TGACGCATCG
ACCGTCGGCG CTCGAGTTCG AACGGACAGC GAGGTGCCGA TGGCCGCGGG GCTGAAGAGT
TCCAGCGCCG CGGCGAACGC GACCGTGCTC GCGACGCTCG ACGCCCTCGA GATCGCCGAC
ACGGTCGACC GGATCGACGC CTGTCGCCTG GGCGTCCGCG CGGCCCGCGA CGCCGGCGTC
ACCGCGACGG GCGCCTTCGA CGACGCCAGC GCGAGCATGC TCGGCGGCGT CACCGTCACC
GACAACACGA CCGACGAACT GCTCGCCCGA GAGACGGTCG ACTGGGACGC GCTCGTCTAC
ACGCCACCCG AGCAGTCCTT CAGCGCCGAT GCCGATATCT CGGCCTGCGA GCGCGTCGCG
CCGATGGCCG ACCTCGTCGC GGAACTCGCT CTCGACGGTC GCTACGGCGA GGCCATGACC
GTCAACGGCT TCGCCTTCTC GGCCGCCCTC GAGTTCCCGA CGGGACCGAT GGTCGACGTC
ATGCCCGACG TTGCGGGCGT CTCGCTGTCG GGGACGGGAC CGAGCTACGT CGCCGTCGGC
GAGCGATCGA CGCTCGAGGC GGTCCGAGAC CGGTGGGACG ACCGAGACGG AACGACACGA
TTACTGACGA CGCGAACGGA CGGAACACAA ACGACATGA
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| Protein sequence | MPMDGRAVAP AAGTVLNALA TGTGSAFAID LETTATVELT DDGEIDAEIT GQPDADTTLI
KRCVAMTLAE HADAAGLDAS TVGARVRTDS EVPMAAGLKS SSAAANATVL ATLDALEIAD
TVDRIDACRL GVRAARDAGV TATGAFDDAS ASMLGGVTVT DNTTDELLAR ETVDWDALVY
TPPEQSFSAD ADISACERVA PMADLVAELA LDGRYGEAMT VNGFAFSAAL EFPTGPMVDV
MPDVAGVSLS GTGPSYVAVG ERSTLEAVRD RWDDRDGTTR LLTTRTDGTQ TT
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