| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_5120 |
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| Symbol | |
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| ID | 8745668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013747 |
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| Strand | - |
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| Start bp | 18114 |
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| End bp | 20060 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646515477 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003406424 |
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| Protein GI | 284176147 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0155589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGAG ACGGAGCCGC GGGCGGCCTT CGATCGGTTA TCGACGGATT CGGCGTCGAT
CGCGTGTTCG ACAGCCTCGA GCGATTCGGC GACGCCGAGC CGCCGGACGC GTGTTCGTGT
GGCGTCGCCA CAACGGGCGA GACCCTCGTC CTCGACGCCG GCGACTGCGA CGGCGACCTC
GCGACCGCGC TCGCGTGTCG CCGGACGGCC GTCGACGCGC TGACCGACCG CGATGCCCGC
CAGATCGTCG TTCGAACGAA CGGCCTCGAG TACCAGTATC GCGGCCGCGG CGTCGAACTG
CTCGCCGCGG CCGGGCAGTT CGTCGACCGA CTGGGAGACC GGAACGAAGC GTTGCTCGCG
ACTGCACGGC GGGATCCGCT CGCGATCGCC GACGAACTCG GACCGCGAAC CGGCGTCGAT
ACCGACATCG TTCGCGAATC GACGCTCGTC GATGTCGCAC GAGGGATCGA GAACTACGAT
GCAGTGCTGT CCCCGACGGT CGGACTCACG ATCGGCCACT ACCGGATCGA TCCGACGATC
CCGGACGACA CGCGGTTGCG GGACGGTCGG TCGCTCGAGA CGGGCAGCGA CGTGCGGATC
TACGACCGAC CCGGCGGCGT CACGGAGTAC GCGCTCGACG TCGTCGATCT GACCCTTTCG
GCGACCGAAC GGTCGCGTCT CCTCGAGGGC TACGAGGCCG TCGCCGAGGG CGTGGTCGAC
GGCGAACGCG CGGCCCCGCG GGCGATCGAA CACGTCACCG ACGGTCCGGC CGATTCACTG
GAGATGGACA TTCTGACGAA GCATACGAGC GGGTACGGAA TTCTCGAGGA CCTGTTCGCC
GATCCCCGGC TTTCGGACGT CTACGTGACG TCGCCCGTGG ATCGAAACCC GCTCCGCGTC
GTCGTCGACG GCGAGTCGAT GGCGACGAAC GTCTATCTGA CGTCCGAGGG CGCACGCGCG
CTCGCGTCCC GGGTGCGACG GACGAGCGGC CGGGCCTTCT CGCGTGCGAA TCCGACGGTC
GACGCGACGG CGGTCCTCGA GAACGGCACC GGCGTCCGCG TCGCCGGCGT CACTGATCCC
GTCGCTGACG GCGTCGCCTT CGCGTTTCGG GAGCGAACGG ACGATCGGTT CACGCTCCCC
GAACTCGTCG CGAACGGGAC GGTGCCGGCG GAAGCAGCGG CGTTCCTCTC GATCGCCGTC
GAGCGAAACG TCGCCGGCCT GATCGCCGGC ACCCGCGGCG CGGGAAAGAC GACGCTGCTC
GGGACCCTGT TGTACGAACT GCACCCCGAG ACGCGAACGG TCCTGCTCGA GGACACGCCC
GAACTCCCGG TCGCCGCGCT CCAGTCGGTC GGGCGAAACG TGCAGGCGCT GCGTACCGGC
AGCGAGGATG GGCCGGAGAT CACCCCGACA GAGGCACTCA GAACCGCGCT TCGACTTGGC
GACGGCGCGC TCGTGGTCGG CGAGATCAGG GGCGAGGAGG CCCGCGTGCT CTACGAGGCG
ATGCGAGTCG GTGCCAACGC CAACGCCGTG TTGGGAACGA TCCACGGCGA CGGGGCCAGC
GAGGTCTACG AACGCGTCGT CTCCGACCTC GGCGTCGCGC CCTCCTCGTT CGGCGCGACG
GATCTAATCG TCACCGTTCA GTCCCGGCGC ACGGCCGAGG GCCGACGACG GCGGCTCGCC
CGCATCGAAG AGGTCATCAG TGACGGCGCC GATCACTGGT TCGAACCGCT GTACGAACTC
GAGGACGGAG TCGCCACGCC GACCGGCCGG ATCGATCGCG GCGAGAGCCG ACTCGTCGAT
CGACTCGCCG GACCGGACGA GACCTACGCC GACGTTCGCC GTGCGCTCGA GACGCGAACG
AACCAGCTGG CGGCGCTCGC CGCCGACGGG CGGACGAGCC CGCGCGAGGT CGCCACGGCC
TGCGCCGAAC GGCAGTACGA CGGGTGA
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| Protein sequence | MTGDGAAGGL RSVIDGFGVD RVFDSLERFG DAEPPDACSC GVATTGETLV LDAGDCDGDL
ATALACRRTA VDALTDRDAR QIVVRTNGLE YQYRGRGVEL LAAAGQFVDR LGDRNEALLA
TARRDPLAIA DELGPRTGVD TDIVRESTLV DVARGIENYD AVLSPTVGLT IGHYRIDPTI
PDDTRLRDGR SLETGSDVRI YDRPGGVTEY ALDVVDLTLS ATERSRLLEG YEAVAEGVVD
GERAAPRAIE HVTDGPADSL EMDILTKHTS GYGILEDLFA DPRLSDVYVT SPVDRNPLRV
VVDGESMATN VYLTSEGARA LASRVRRTSG RAFSRANPTV DATAVLENGT GVRVAGVTDP
VADGVAFAFR ERTDDRFTLP ELVANGTVPA EAAAFLSIAV ERNVAGLIAG TRGAGKTTLL
GTLLYELHPE TRTVLLEDTP ELPVAALQSV GRNVQALRTG SEDGPEITPT EALRTALRLG
DGALVVGEIR GEEARVLYEA MRVGANANAV LGTIHGDGAS EVYERVVSDL GVAPSSFGAT
DLIVTVQSRR TAEGRRRRLA RIEEVISDGA DHWFEPLYEL EDGVATPTGR IDRGESRLVD
RLAGPDETYA DVRRALETRT NQLAALAADG RTSPREVATA CAERQYDG
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