| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_5002 |
|---|
| Symbol | |
|---|
| ID | 8745632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013746 |
|---|
| Strand | - |
|---|
| Start bp | 174054 |
|---|
| End bp | 174719 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646515457 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_003406404 |
|---|
| Protein GI | 284173023 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1403] Restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC TTGAGAGGCA GATCAACTCA CGCTACGACG ATCCAGACAC ATATTCGGGG
AATCGTCCGC CAGACTGGGA AGCCCGTCGA AAGACGGTCT ACCGACACGA CAACTGGACG
TGCCAATCGT GCGGTCGACA AAGCGGTCCG CATGCGGGTA ACGAGGGGGT TCGGCTCCAC
GCCCACCACA TCGTTCCGTT GTCAGAGGGT GGCTCGAACC GGCTGTCGAA TCTGGAAACG
CTGTGTGAAC CATGCCACCA GAACCAACAC GATCACGATA TCTTTACTGG CGACTGGGTC
GGTGATGGTC CGCACGTGTA TACGGTTGGG TCACTGCGAG CGACTGCACG CGGGATTTTT
GTTGCGCTGG CAATCGCTCT GTGGGCCATC CTTGTTGTTC GGGTGATCGC TCTTTCCGCA
GGATATGCCC CGATGGCAAT GGAGATCGAG GCTGCCCTCC TAGTAGGAGC GACGCTCCTG
GCAAGTGTGG TAGTCGTCTC GAAACCACTC CTCGTCACGA GTGTACTGGG ATTCGTGGCC
GCTGTGATGA CGGCGTTTGC CTGGACCGAC TTTGGATGGA GTCCCGAACT CGCACTCATC
GGAGTGATCG TATGGCCGCC AGTCATCCTC GGAGCATGGG CAATTGCCTG TGACTATATA
CAGTGA
|
|---|
| Protein sequence | MSTLERQINS RYDDPDTYSG NRPPDWEARR KTVYRHDNWT CQSCGRQSGP HAGNEGVRLH
AHHIVPLSEG GSNRLSNLET LCEPCHQNQH DHDIFTGDWV GDGPHVYTVG SLRATARGIF
VALAIALWAI LVVRVIALSA GYAPMAMEIE AALLVGATLL ASVVVVSKPL LVTSVLGFVA
AVMTAFAWTD FGWSPELALI GVIVWPPVIL GAWAIACDYI Q
|
|---|
| |