| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4960 |
|---|
| Symbol | |
|---|
| ID | 8745590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013746 |
|---|
| Strand | - |
|---|
| Start bp | 129301 |
|---|
| End bp | 130575 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646515422 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003406369 |
|---|
| Protein GI | 284172988 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCT CGGACCCCCC ACCCAGATAT CGATGGGTGA TTCTCTCGAT AGTTACCGTC
ACACATATTA TTGCAATTAG CCTTATTTGG ACGGCTGTAT CAGCTCTAGC TCCCGAAGTC
GCTGGTGAAC TGGCGATCCC AGCAACAAAA GCAGTTTTCG CCTACTCGTT GATTAGTATC
ATGTTTGTGT TCTTGATGCT TCCTGGCGGG ATGTTGGCCG ATCATTTCAA CGTCCGATGG
GTCGTTGGCA TCGGGGCACT CATTGCAGGA ATCGGCACAG CTCTCCGGTG GGTGATTCCG
ACCTACACAG GTCTTATAGC CGGAAGCATT GTCGCGGGAA TCGGTATGTC TCTGGTCAAC
CCGAACCTGA TTAAGACAAC GACGGAGTGG TTTCCGTCAA ACGAACTCGG CTTTGCACAG
GGGGTCGTAT TTGCAGGGTG GGGTGTTGGT GCTGGTCTAG CAGGATTTCT TTCGAGAGGC
ATGCTACTCG ATATTGTCGG TTCGTGGGAG AATGTTTTTC TTGTCTACGG AGTTGCTACC
CTCGTGGTTG CGGTCGTCTG GTTACTCGTA GTTCGGTCGC CAACTGCTCA AGAACAACCA
GACTACATCA GTCTAACTGA GACTGGAAGT AATCAGGACA AGTCAACCAC AAGTGTGATT
AGAGATATAT TCTCCAAGAA AAACACATAT TTCGCCTCGT TACTGACGAT TTGTGGATTC
TATACTGGTG TTGGATTCAT TGGTCTCTTT CCCACATGGG CAGTGAGTTC GTCATTCTCG
GTCTCTAGCA CTCTCATCGG TGGATTATTC TTCTTAATTG CGGCTGGCTC GGTGCTATTT
TCGGCTGTTT CCGACTATAT CGTGAGAAAA TCAGTGCTCT ATCTCACGCT AACCGGACAG
ATATCTGGTG TTCTCATCGT CGGGTTTGCT CCCTCCCGTC TAATTTTTGT TTTGGGGGCA
GTGTTAACTT CGCTCTGTGG TGGAGGTCTC TTCGGGATGT TCTATGTACT TCCAGGAGAC
CTTCCTGAGA TCACTCCGGC TAGTGCCGGT ACTATGGCAG GCGTCCTTCT TTCGATTGGC
CAAATCGGTG CAGTTGTTGG CCCTATTATC GGTGGCCGCT TGCTTGAATC AAGTGGTATC
GCTATCTCTG CAATTGCCAT TAGCCTCCCA TCACTAGTAG GTCTACTGGC GATCTGGAAG
CTGAATCTTC GATCAGATAG TTCCCCTACT CCTGTAAATT CAAATCCATC GGGGAACGTG
GTTAACTCTA AATAG
|
|---|
| Protein sequence | MTSSDPPPRY RWVILSIVTV THIIAISLIW TAVSALAPEV AGELAIPATK AVFAYSLISI
MFVFLMLPGG MLADHFNVRW VVGIGALIAG IGTALRWVIP TYTGLIAGSI VAGIGMSLVN
PNLIKTTTEW FPSNELGFAQ GVVFAGWGVG AGLAGFLSRG MLLDIVGSWE NVFLVYGVAT
LVVAVVWLLV VRSPTAQEQP DYISLTETGS NQDKSTTSVI RDIFSKKNTY FASLLTICGF
YTGVGFIGLF PTWAVSSSFS VSSTLIGGLF FLIAAGSVLF SAVSDYIVRK SVLYLTLTGQ
ISGVLIVGFA PSRLIFVLGA VLTSLCGGGL FGMFYVLPGD LPEITPASAG TMAGVLLSIG
QIGAVVGPII GGRLLESSGI AISAIAISLP SLVGLLAIWK LNLRSDSSPT PVNSNPSGNV
VNSK
|
|---|
| |