| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4752 |
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| Symbol | |
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| ID | 8745419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | - |
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| Start bp | 362314 |
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| End bp | 363924 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646515250 |
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| Product | BCCT transporter |
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| Protein accession | YP_003406197 |
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| Protein GI | 284172815 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.337094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAC GGAACGCCGT AGAACGCTTT GCCGAGGAAC TAGACGCGGG TGTGTTCAGC
ATTGGCTTCG GCGTAGCACT GATAGCGATC GTCGTGTTCT TCCTCAACCC TGAGGCGTCC
GCCGAAAAGA TGGGCGCGGT CAACGAGTAC CTTTGGTCGG AGTTCATGTG GGTATACGTG
TTCTCGATGT TTCTCATGGT CTTGTTCTCC CTATGGCTGA TGTTCGGCCC GTGGGGAGAC
ATTAAGCTCG GTGATCCGGA CGAGTCGCCC GAATTCAGCA CCCCGGCGTT CTTCGCGATG
ATGTTCTCGG CGGGCATCGC GGCGGGCATC GTGTTCTGGG GCCCGGCGGA GGCGCTGTTC
CACTACGACA CCGTCCCCCC GATGATCGGT GCGGAGTCAC AGACACAGTC AGCAGCGATC
GGCGCTATTC AGTACACGCT ATTCCACTGG GGGATCTCGT ACTGGGTTCC GTACCTGATC
GTCGCGATTC CGATCGCCTT TTTTGCGTAC CGGCGAGACG CGCCGATGCG CATCTCGACG
CTGCTAGCGC CCTTTCTCGG CGTCGATAAC TTGGACCGTC CCATCGCCAA GGTCGTCGAT
ATTCTGGCGG TGTTCGCGAC TATCGGCGGT ATCGCGACAA CCTTAGGGTT CGTCGGAAGT
CAGTTCCTGA CCGGTCTGCA ATACAACTAC GGCGTCACTC TCGGCGATGG CGGTACCATT
CTCGTCATTA CGGGGATGAC ACTGGCGTTT ACTGCCTCGG TCGTCTTGGG CGTCAAGCGT
GGTATTCGGA AAGTTTCGAT GTTCAATATG TACGGATTCG CTCTGCTGTG TCTAGCCACG
TTTCTGCTGG GTCCAACGAC CTACATCATG AACACCGGCC TGCAGGCCAT CGGCGAGTAC
GCCAACGGCT TTCTCCGGAT GAGCCTGTAC ACGAACGCTT CGGGGTCCGG CGAATGGGTC
GGCAACTGGA CCGTGTTCTA CTGGGCGTGG GTGTTCTCCT GGGCGCCGTT CGGCGGTCTG
TTCGTCGCGC GCATCTCTCG CGGACGAACT ATCCGGCAGG TGACCGCGAC GGCATTGATC
GGCGCGACCG TCGCTACCAT CCCGTGGTTC CTGACGATGG GTGGTACGGC GATTCACCTC
GAACGGACCG GTGCTGCGCC GATGCTCGCC GCCGTTTCGG AACACGGCGT CGCCGTCTCC
GGGTTTCCGC TGTTCGCCAA TCTGCCCCTG GGGTCGCTGC TGTCGCTCGT CTTCATGATG
CTCGTGATCA CGTTCTTCGT GACCTCCGCC GACTCCTCGA CGCTGGCGCT GGGAATGCTC
ACGACCGGCG GCAAGGAACA CCCCTCGACC ATCAATCGCG TGCTCTGGGG CGGCTTGATG
GGCGGCCTCG CGTCGCTGCT TATCGTCGGC GGCGGCCTCG ACGCGCTGCG CTCCTCGGCT
ATCATCACCG GCGGACCATT TGCCGTCATC GGCGTCCTAG CTATCGTCGG GATGTGTCTG
GAGTTCCAAC GTATCCGTCC GGTCCTGCAG GCGAACACCG ACGATCAGTC CACCGAAATC
GACGAACAGT CGCCGCCCGT GTTTGCGACG AACACGGACG ACGACGACTA A
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| Protein sequence | MKIRNAVERF AEELDAGVFS IGFGVALIAI VVFFLNPEAS AEKMGAVNEY LWSEFMWVYV
FSMFLMVLFS LWLMFGPWGD IKLGDPDESP EFSTPAFFAM MFSAGIAAGI VFWGPAEALF
HYDTVPPMIG AESQTQSAAI GAIQYTLFHW GISYWVPYLI VAIPIAFFAY RRDAPMRIST
LLAPFLGVDN LDRPIAKVVD ILAVFATIGG IATTLGFVGS QFLTGLQYNY GVTLGDGGTI
LVITGMTLAF TASVVLGVKR GIRKVSMFNM YGFALLCLAT FLLGPTTYIM NTGLQAIGEY
ANGFLRMSLY TNASGSGEWV GNWTVFYWAW VFSWAPFGGL FVARISRGRT IRQVTATALI
GATVATIPWF LTMGGTAIHL ERTGAAPMLA AVSEHGVAVS GFPLFANLPL GSLLSLVFMM
LVITFFVTSA DSSTLALGML TTGGKEHPST INRVLWGGLM GGLASLLIVG GGLDALRSSA
IITGGPFAVI GVLAIVGMCL EFQRIRPVLQ ANTDDQSTEI DEQSPPVFAT NTDDDD
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