Gene Htur_4716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4716 
Symbol 
ID8745311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013745 
Strand+ 
Start bp315558 
End bp316214 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content55% 
IMG OID646515219 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003406166 
Protein GI284172784 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATCA CCGTAAAAGC CTACGCCGAA CACGACGAAC TCGCTCTGGT CCCGACGTTG 
CGGAGCATAG ATGGTATCGA AATCGAAGTG ATAACGCAGG CGAACACCGA TCCGGATTCG 
GACGTCTTTC CGTTTCTCAT CACGTACGAC GACCGCGACG AATTGGAGCG TCACCTCGAT 
TCTGATCCGA CCGTTGACGG TTATGAACTC GTCGACGCGA ACGACGACAT GTTCATCTAC 
TATATCGAAC ATTCAGACGG GACCATATTA CTCAGTCCGA TCCTCACGGA AGTGAACGGA 
TTCATGTTGC GTACGGAAAC CAGACGTCGC GGATGGTTCG TCCAGTTACA ACTCCCGGAC 
CGAGAGGCGC TCAATACGAT CTGGGAGTAC GCCGAAGGGT GCGGGATGAA GTTCGAGATT 
ATCGAACTAC ACGGGAGCAC GGGGACCGAA AAAGATATTT CGTTCGGGCT GACGGACGAA 
CAGATCGAAG CACTGCAAAC AGCGTACAAG TGCGGGTACT TCAACGAGCC GCGAGACACG 
GCCCTCAGCG GTGTTGCCGA CGAGGTCGGC GTCTCCTCGA CCGCGATGAG CGGTCGGCTT 
CGACGCGGGA TGCGAAACTT GATCTCTGCG ACGTTGATGG ACGAAGATAT CGACTGA
 
Protein sequence
MPITVKAYAE HDELALVPTL RSIDGIEIEV ITQANTDPDS DVFPFLITYD DRDELERHLD 
SDPTVDGYEL VDANDDMFIY YIEHSDGTIL LSPILTEVNG FMLRTETRRR GWFVQLQLPD 
REALNTIWEY AEGCGMKFEI IELHGSTGTE KDISFGLTDE QIEALQTAYK CGYFNEPRDT 
ALSGVADEVG VSSTAMSGRL RRGMRNLISA TLMDEDID