| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4708 |
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| Symbol | |
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| ID | 8745304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | + |
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| Start bp | 303098 |
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| End bp | 304756 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646515212 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003406159 |
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| Protein GI | 284172777 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.213133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGAG CTGAATCAAA CGGACCGATC GGACAGTTCC TCGAGGAACT CGACACGCCA
GTATTCGCGG TCGGCTTCTT CATCGCCGCC GCAGCAGTGA TCGCGTTCGT CCTCTGGCCG
GAGGCCGCGT CGGGGTACAT GACCAGCGTG AACGATTTCC TGTGGACTGC CGCGGGCTGG
TGGTACCTGG TCGCGATGTT CGCCCTGGTC GCGTTCGCCG GCTTCCTGAT ATTCGGACCG
TGGGGCAACA TCAAACTCGG CGATGAGGAC GAAGAGCCGG AGTTCACGTT CCTCGCGTAC
TTCGCGATGC TGTACTCGGC GGGGATCGCC GCCGGGATCG TGTTCTGGGG CCCCGCCGAG
GCGATCTTCC ACTACGACAC CGTCTCGCCG TTCATCGGCG CGGAGTCGCA GTCGGCGGGG
GCCGCCGTCG GGGCGATCCA GTACACGTTC TTCCACTGGG GCCTCTCCGC GTGGACCGCG
TACGTGATCA TGGCGCTCCC GATCGCGTAC TTCGCCTACC GATACGATGC GCCGCTGCGC
ATCTCGACGG TGATCGCACC GTGGGTCGGC ATCGAGAACC TCGACCGCCC GATCGCGAAG
GTCATCGATA TCCTCGCCGT GTTCGCGACG ATCGGCGGCG TCGCGACGAC GCTGGGACTG
GTCGGCAGCC AGTTCCTCGT CGGCGTCGAG TGGATCACCG GTGTGAGCGT CGGCGATCTC
GGGACGATCG CCGTGATTAC CGGGCTGACC GTCGCGTTCA CGATCTCGGT CGCGCTCGGC
GTGGAGAAGG GAATCCGCCG CCTCTCGTAC TTCAACATGG CCCTGTTCGC CGTGGTGACC
GTCGCGACTT TCGTCCTCGG GCCGACGACG TACATCATGA CCGTCGGCAC CGAGGCGCTC
GGCGCGTACA TCAACGACTT CGTCACGATG AGCTTCTACA CCGGCGCCGC CGAGAACGTC
GGCGGCGGCG TCAGCGGCTG GGTCGGCGGC TGGACGGTCT TCTATTGGGC GTGGTGGTTC
TCTTGGACGC CGTTCGTCGG GCTGTTCATC GCGCGCATCT CGCGCGGTCG GACGGTGAGA
CAGGTCGTCG TCACGGGCGT CGTCGCCTCG ACGGGCATCA CGATTCCGTG GTTCGCCACG
ATGGGCGGCA CCGCGATCTT CCTGCAGGAG AACGGTCGCG CCGACATCCT CACCGTCATC
AGCGAACTCG GTGAGGCCGG CTCCGGATAC CCGCTGTTCG AGGCGTTGCC GCTCGGCGGC
GTGTTGACGG GTCTGTTCCT CGTGCTCGTG ACGACGTTCC TCGTCACGTC GGCCGACTCC
TCGACGCTGG CGCTGGGAAT GCTCACGACT GGCGGAAACG AAAAGCCCTC GACGATCAAC
CGCGTCATCT GGGGATTCCT CATCGGCGCG CTCGCGTCGC TGCTGATGGT CACCGGTGGC
GTCGACGCCC TACAGCAGGC CGCGATCATC ACCGGCGGAC CGTTTGCGGT CATCGCGTTA
CTCGCCGTCG CAGCGATGAT CGTCACGTTC AGCAGTCATC GACCGCTGTT CCTCCGCGAA
GAGGACAACG TCTCGCTCCC GTCTCCCGAG CCCGAGACGT CCGACCGCGA TGCCGCCGAC
GCTGATCCAT CCGCCGACGC CGATCCGTCC GACGACTGA
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| Protein sequence | MARAESNGPI GQFLEELDTP VFAVGFFIAA AAVIAFVLWP EAASGYMTSV NDFLWTAAGW
WYLVAMFALV AFAGFLIFGP WGNIKLGDED EEPEFTFLAY FAMLYSAGIA AGIVFWGPAE
AIFHYDTVSP FIGAESQSAG AAVGAIQYTF FHWGLSAWTA YVIMALPIAY FAYRYDAPLR
ISTVIAPWVG IENLDRPIAK VIDILAVFAT IGGVATTLGL VGSQFLVGVE WITGVSVGDL
GTIAVITGLT VAFTISVALG VEKGIRRLSY FNMALFAVVT VATFVLGPTT YIMTVGTEAL
GAYINDFVTM SFYTGAAENV GGGVSGWVGG WTVFYWAWWF SWTPFVGLFI ARISRGRTVR
QVVVTGVVAS TGITIPWFAT MGGTAIFLQE NGRADILTVI SELGEAGSGY PLFEALPLGG
VLTGLFLVLV TTFLVTSADS STLALGMLTT GGNEKPSTIN RVIWGFLIGA LASLLMVTGG
VDALQQAAII TGGPFAVIAL LAVAAMIVTF SSHRPLFLRE EDNVSLPSPE PETSDRDAAD
ADPSADADPS DD
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