| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4647 |
|---|
| Symbol | |
|---|
| ID | 8745250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | - |
|---|
| Start bp | 227161 |
|---|
| End bp | 227949 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646515158 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_003406105 |
|---|
| Protein GI | 284172723 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACGA CAGACATTCC GGCAGCGGAG GAGAAGGGAC CGACTGCGAG AACAACCGTT
ACGAGCTTCC GCGTAATCGA AGCGCTCAAA GAGCGTGGGA CAGCAGGAGT GAGCGAACTA
GCCGACGAAC TCGACCTCGC GAAGGGAACG ATTCACAAGC ACCTCAATAC GCTTCGGCGG
CTCGATTACG TTATCAAGGA TGGCCACGCC TATCGATTAA GTGTGAGTTT TCTCGGTCTT
GGAACGAGCG CTCGTGCTTG CCTTCCCATC GCCGAGACGG TCGTAGAGCC GCTGGAAGAT
CTCGCATCAA CGACCGAAGA GACCGTGGGT CTGATGATAC CAGAGCACGG GCACGGGATC
TACATTCTTC GTGAGAGTGC GCAGAAACAG ATGGAGATGG CGGCGAGAGA GGGAGATCGC
CTTCCAATGC ACGCAACTGC GGGCGGAAAA GCGATCCTTT CGTATACGCC GCCTGAGGAA
CGCGAGCGGA TCCTCGACTA TCGCGGACTG CCAAAGCTGA CCGATAATAC CATTACGGAT
CGAGATGCCC TTGAAGACGA ACTGCAATTG ACTCGAGATC GTCGGATGGC CTACGACCGC
AGCGAGTACC GCGAAGGATG GCACTGTATC GCCCATCCCG TTACGAACTC GGACGGCCGG
GCGATCGGGG CAATTACTGT CTCAGGGCCA GCTGCCCGAA TGAAAGAGAA GGATGCGAGC
ACCTATTTTG CGAGCATTAT CGGTAGCACC GCCAACTCGG TGCAGAACGC ATTCGCCCTC
GATCGTTGA
|
|---|
| Protein sequence | MGTTDIPAAE EKGPTARTTV TSFRVIEALK ERGTAGVSEL ADELDLAKGT IHKHLNTLRR
LDYVIKDGHA YRLSVSFLGL GTSARACLPI AETVVEPLED LASTTEETVG LMIPEHGHGI
YILRESAQKQ MEMAAREGDR LPMHATAGGK AILSYTPPEE RERILDYRGL PKLTDNTITD
RDALEDELQL TRDRRMAYDR SEYREGWHCI AHPVTNSDGR AIGAITVSGP AARMKEKDAS
TYFASIIGST ANSVQNAFAL DR
|
|---|
| |