| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4617 |
|---|
| Symbol | |
|---|
| ID | 8745222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | - |
|---|
| Start bp | 194408 |
|---|
| End bp | 194929 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646515130 |
|---|
| Product | putative transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003406077 |
|---|
| Protein GI | 284172695 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACA CCCCACTCGA CGACGTGGAC CGGAGCATCT TGCACCAGCT CCAGCTCAAC
GCCCGCCAGA CCGATACGGA GATCGCCGAG AAGGTGGATG TGACTTCCAC GACAGTCCGG
AATCGCCTCG ACAAACTCGA AGATAAGGGC GTGATCCGCG GCTATTACCC TGAGATCGAC
TACGAGGAAG CAGGCTACCC CCTCCACGTC ATGTTCGTCT GCACGGTCAA TCCGAATAAC
CTGAAATCGA TGGCCGAACA GATCCTCGAC ATTCGCGGTG TGGTGACCAC CCGCGATTTG
CTTGGAGGCG AACGGAATAT CCACGTCGAG ATCGTCGCCG GTTCAGTCAG AGAGATCGAA
GACATCCGCA ACGAACTGGC GGACTTGGGC ATGACAATCA ACAGCTCCGA GATTATCTCC
GAGACGCAGG TCCAGTCATG GGACCACTTC TATCCACGGA CGAGCCCCGA CGCGAATCAG
GACGACGACA CCGACGACGG GTCGGTCACC GATCAAAGGT AG
|
|---|
| Protein sequence | MDDTPLDDVD RSILHQLQLN ARQTDTEIAE KVDVTSTTVR NRLDKLEDKG VIRGYYPEID
YEEAGYPLHV MFVCTVNPNN LKSMAEQILD IRGVVTTRDL LGGERNIHVE IVAGSVREIE
DIRNELADLG MTINSSEIIS ETQVQSWDHF YPRTSPDANQ DDDTDDGSVT DQR
|
|---|
| |