| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4468 |
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| Symbol | |
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| ID | 8745097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | + |
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| Start bp | 56910 |
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| End bp | 58355 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646515005 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003405952 |
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| Protein GI | 284172570 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0713709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCGGG TCCCGAATCC GTTCCGCCTG GTAATTCTCT ATATCGGTCT CGCGCTCGCG
CGCGCCGGAC TCATCGACCG CGACCGCGCC GTCCAGACGA CCGCCCTCGC GTGGCCGCGG
ATCGTTACCG GGATCGCGCG GATGTCGAAA AACGCAGTCG ACGTGGCGAT GGTCGGTGTG
GCAGTCGGCA CCGCCGCCGT CGCCGGCGTC GGGTTCGCGG GACCGTTCTG GGGACTCGCC
TTCGCGATCG GCGGCGGCGT CGCCGGCGGC GCGATCGCGC TCGTCTCACA GCGATACGGC
GCGGACGCCA CCGACGAACT GGGGCTCGCC GTCCGCTCGA GTACACTGCT CATCGTGGTG
CTGAGCGTTC CGATCACGGT CGTGTTCTGG TTCGTTCCCC ACGAGCTTAT TTCCGTACTG
AGCAGCAACG AACGGGCGAT CGAGTACGGG GCGACGTACC TGCAGGTCGT CGGCTTCGGA
ATCCCCTTCG CGGGGCTGAA CCTCGTCGGA AGCCGGACGC TCGTCGGCGC CGACGACTCC
TACATCGCGA TGCAGGTTCG GGCCGGCGGC GCCCTCGCTA ACATCGGTCT GAACGCCGTG
TTCATCTTCG GATTCGGCTG GGGCGTCGCC GGCGCGGCGC TCGGGACGGT CCTCTCGAAC
GTCGTCGTGA CGGCGACGTT CGCGATCGGG ATCAGCCGCG GTCGCTTCCC CGGCATCGGC
GAGTTTCCCG TTCAGGTGGA TCCGCTGGGG ACGTATCTCG ATCCCGGGAC GGTCCGCGAT
CTGATCGAGA TCGGACTTCC GATCGGCGCC CGGAACCTCG TCTGGACCGT CGCCGAGTTC
CCGATGCTCT CCATCCTCGA TATCTTCGGG GAGAACACCG TCGCCGCGTT CGTCATTGCC
CGCCGCATCT GGGGCATAAT GAACGCGCCC GGCTGGGGGT TCGGACTCGC TTCGTCCAGT
CTGGTGGGCC AGGCGCTCGG ACGAAATGAC GAGGTGACGG CCGAAGCGTA CGGACGCGAC
ATCATCCGAT TCGCGGTGGC GACGTACGCC CTCTCCGCGA TCCTCATCGC GCTGTTCGCC
GAACAGATCG TCGTGTTGTT CGCGAGCGAT CCGACGAGCC CGGAGATTCC GATCGCCGTC
GACCTCATCT ACGCCGCCTG TGCCGCGGTC GTCTTTCAGG GCGTCTCCGG CGCCGCTGCC
GGCCCGCTCG ACGCGAGCGG CGACACGCGA ATTCCGTTTG CCAGCCAGTT CCTCGGGATG
TTCTTCGGCT CGATCCCGCT CGCGTACCTC GGCGCGACGA CCGCGCTCGG ATACTGGGGG
CTGTACCTCG CGTTCGTCGC CGAGACGACG ATTCCCGCCG CGATCAACTA CTGGCGGTTC
CGGACCGACA AGTGGAAATC CATCAGCGAA GCGTACCGGC CCGACGCCGC GGTTGGCGAC
GACTGA
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| Protein sequence | MTRVPNPFRL VILYIGLALA RAGLIDRDRA VQTTALAWPR IVTGIARMSK NAVDVAMVGV
AVGTAAVAGV GFAGPFWGLA FAIGGGVAGG AIALVSQRYG ADATDELGLA VRSSTLLIVV
LSVPITVVFW FVPHELISVL SSNERAIEYG ATYLQVVGFG IPFAGLNLVG SRTLVGADDS
YIAMQVRAGG ALANIGLNAV FIFGFGWGVA GAALGTVLSN VVVTATFAIG ISRGRFPGIG
EFPVQVDPLG TYLDPGTVRD LIEIGLPIGA RNLVWTVAEF PMLSILDIFG ENTVAAFVIA
RRIWGIMNAP GWGFGLASSS LVGQALGRND EVTAEAYGRD IIRFAVATYA LSAILIALFA
EQIVVLFASD PTSPEIPIAV DLIYAACAAV VFQGVSGAAA GPLDASGDTR IPFASQFLGM
FFGSIPLAYL GATTALGYWG LYLAFVAETT IPAAINYWRF RTDKWKSISE AYRPDAAVGD
D
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