| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4399 |
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| Symbol | |
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| ID | 8745027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 667896 |
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| End bp | 669263 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646514936 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003405883 |
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| Protein GI | 284167605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0609802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTA GTGGCAGGGC AACGAATCGG AGTGATAGGT CCGAGAATGG CGATTCCGCA
GCGATCACGA AGCACAGTTC GCGACGTCGA TTTCTGGCCG GCGTCGGCGG TGCGGCGGCC
GTAACCGGGC TCGCAGGTTG CGTCGGTGGT GGCGGTAACG ATAGCGACGT CAGCATCATC
GCCGTCGAGG GCGAAGGCCG ACTCGTGGAG AATTTGATCG ACGACTACGT CAGGGACGAG
ACGGATCTCT CCATCGACGT CACGTTATTC CCGTACGCGA ACCTCTACGA ACGCGTCAGC
AGCGTCCTCA CGACCGGCGG AACGGGGTAC GACGCCATCC TCATGGACGA CACGTGGTTC
CCGCAGTTCG CGGCGAACCT CGATCCGCTC GAGCAGTGGC TTCCCGACGG GCTGCCCACG
GAGCAACTCA TCGACACGAC GGTCGACATC ACCACGTGGC CGACGCCCGG CGCCCCGAAA
GTTCCGTCCG CCGAGGATAT GGACGAGAAG ATCCGCGGGC AGGTCGTCGT GGGGAACACG
CAGATGTTCG TCTACAACAC CGCCTACTAC GAGGAGGTCG GTGAAGAGGA GCCGAAGACG
TGGGACGATG TGTTACGCGC CGGGCAGAGC ATCGACGAGG AGATCGCGGA CACGAACGGG
TACGTGATCC GCGGTCAGCG CGGCAACCCG GCGAACACGA ACTTCATGAG CATCGGGTGG
TCGAACCTCG GAGACATGTT CGACGAGGAC TGGCGGTACC AGTGGGACTC CAGCGAGGGC
GAGGACGTTG TCAGTTTCTT CGTCGACGAT CTGCGATCGA TCTCGCCGGA CGGCGTCGGA
TCGTTCAACA GCGATCAGGT GCTGAATCGG ATCGGCGAGG GCTCGGCCGC CCAGGGGATG
GCGTGGCCGG CCGCGGCGTC GACGCTGCTC GACGACGACA CCGCAGAAGC CGACAATCTG
GAGTTCATTC CGATCCCGGA AGGCGAGGTA CAGCAGGCGC CGATGCAGGG CAACTGGCTG
CTCGGTATCA ACTCGAACAT CTCCGACGAC CGGAAGGAAG ACGCCGGCAC GGTCATCCAG
TCCATCATCT CCAAGGAGGC ACAGGACCGC TACGTGGAAC TCGGCGGCGT CCCCTTCCGC
CACGACACCT TCGAGGACAA CATGGACGCC GAGCCGTGGT ACGAAGCGCT GTACGAGAGC
CTGCAAAACG CCAAACCGCG GCCGCGGACG CCCCTCTGGA ACGAGATCGA CGTGACCCAA
GGGGAGTACC TCAACAGCGC ACTGACCGGC GACATGAGCC CGGCCGAGGT CGTGAGCGAA
ACCAAGAACG AGGTCGAGTC GATCCTCGAA AACGCGGGAT ACTACTAG
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| Protein sequence | MPTSGRATNR SDRSENGDSA AITKHSSRRR FLAGVGGAAA VTGLAGCVGG GGNDSDVSII
AVEGEGRLVE NLIDDYVRDE TDLSIDVTLF PYANLYERVS SVLTTGGTGY DAILMDDTWF
PQFAANLDPL EQWLPDGLPT EQLIDTTVDI TTWPTPGAPK VPSAEDMDEK IRGQVVVGNT
QMFVYNTAYY EEVGEEEPKT WDDVLRAGQS IDEEIADTNG YVIRGQRGNP ANTNFMSIGW
SNLGDMFDED WRYQWDSSEG EDVVSFFVDD LRSISPDGVG SFNSDQVLNR IGEGSAAQGM
AWPAAASTLL DDDTAEADNL EFIPIPEGEV QQAPMQGNWL LGINSNISDD RKEDAGTVIQ
SIISKEAQDR YVELGGVPFR HDTFEDNMDA EPWYEALYES LQNAKPRPRT PLWNEIDVTQ
GEYLNSALTG DMSPAEVVSE TKNEVESILE NAGYY
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