Gene Htur_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4397 
Symbol 
ID8745025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp666018 
End bp666926 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID646514934 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003405881 
Protein GI284167603 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.46242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAG AACAACAACC GGACGTTCCG TTCAGGGAAC CGTCGCGAAT CGAACGACTA 
CAGGAGACCC TCGCAGAGAA GGGCATCAGC AAAGCGGTCA TCTACGGAGT GCTCGGGTTC
TTCCTGCTCT GGACGCTGTT CCCGGTCTAC TGGCTCGTCT CGGGTGCGCT GAAGTCGCGA
CAGACGCTGC TGTCGTTTCC GCCGGCCTGG ATCCCGGCGG AGTTTCAGGT GAGCAACTTC
GCCCAGCTGT TTGTCCAGCG CCCGGAGTTC TACCAGTACA TCTTCAACAG CATCGTGATC
ACGGTCGTGA CGACCATCAT CGCGACGACC ATCGGGGCGG CGGCTGCGTA CGGGTTCGTC
ACCTTCGACT TCCCGTACAA TCTGGACTTC CACCTGCCGT TTTACATCCT CTCGACGCGG
TTCATGCCGC CGATCGTGAC GATCATTCCG CTGTTCGTCA TCTTCCGGAA TCTCCAGCTG
GTGAACACGC TGTACGGGCT GATCTGCGTG TACGTGATGT TCAACATCCC CTTCGCCGTC
TGGATGATGA AGGGGTTCTT CGAGGAGGTG CCGGCCAGCC TCGTGGAGTC CGCGATGCTG
GACGGGCACA CCCACATCGG GGCGTTCTTC AAGATCGTCC TGCCGCTGGT CAAGCCCGGC
CTGCTCGCGT CGGCGATCTT CACGACGATC ATTACCTGGA ACGAGCTCCT GTTCGCGATC
ATCCTGACCC AGGACGTCGC GGCGATGACG CTGCCGGTCG GCCTCTCGTC GTTCGTCACG
AAGTACTCGG TCCAGTGGAT CAACGTCAGC GTCGCCGGGA CGATCGCGCT CATCCCGGTG
CTCCTGTTCG CGTTCGTCGC GCGTCAGGAG CTCGTTCGCG GATTCAGCAT GGGGGCAGTC
GGCAAATGA
 
Protein sequence
MATEQQPDVP FREPSRIERL QETLAEKGIS KAVIYGVLGF FLLWTLFPVY WLVSGALKSR 
QTLLSFPPAW IPAEFQVSNF AQLFVQRPEF YQYIFNSIVI TVVTTIIATT IGAAAAYGFV
TFDFPYNLDF HLPFYILSTR FMPPIVTIIP LFVIFRNLQL VNTLYGLICV YVMFNIPFAV
WMMKGFFEEV PASLVESAML DGHTHIGAFF KIVLPLVKPG LLASAIFTTI ITWNELLFAI
ILTQDVAAMT LPVGLSSFVT KYSVQWINVS VAGTIALIPV LLFAFVARQE LVRGFSMGAV
GK