Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4391 |
Symbol | |
ID | 8745019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | + |
Start bp | 660372 |
End bp | 661139 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646514929 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003405876 |
Protein GI | 284167598 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.143749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAGA CGACGAAATC GAGAACGATT CAGGCGGTGG GGATCACGCT CGAGATTATC GACTACCTTC ACGAGCACGA CAGCGCGCGG ATCACCGAGA TCGCGAACGA ACTCGGGCGG GCGAAAGGAA CCATCCACTG CCATCTGGCC ACCCTACTCG AGAAGGAACA CGTCATCAAG AGCGGGGACG AGTACCAGCT CAGTCTCCGC TACCTCGAAC TCGGCGAGGG AGTGAAAGAC CGGCTGGGGT TCTACGATGT CGTCACCGAC GAACTGGACG AACTGGCCGA AGAGTCCGGC GAGTTGGTAC AGTTCGCGAC GGAAGAACAC GGCCGCGCGG TGTACCTGTA CAAGACGGGC GGCGACCGGG CCGTCCAGAC CGCCTCGTCG ATCGGAAAAC GGGAGTACCT CCACTGCCTC GCGCTCGGAA AGGCGATCCT CGCACACACC CCGCGCGAGC GCGTCGAAGA GATCATCGAT CGCCACGGGT TGAAGCGGTA CACGCCCCAG ACCATCACCG ACCGCGAGGA ACTCTTCGAC GAACTCGAGG CGGTCCGCGA GCGCGGGTAC GCGTTCGACG AGGAAGAGAA GATCGAGGGA CTACACTGCG TCGCAGCGCC GGTCATGGCC GGCGAGGACG AAGTCCTCGG TGCCGTCAGT CTCTCCCGAC CCTTGAGTCG GATGACGGGC GATCAGTTCA AGGAGGAAAT CCCGAATATG GTCACCCGCT CCGCGAACGT CATCGAAATC AACGCGAAGT ACTCCTGA
|
Protein sequence | MAKTTKSRTI QAVGITLEII DYLHEHDSAR ITEIANELGR AKGTIHCHLA TLLEKEHVIK SGDEYQLSLR YLELGEGVKD RLGFYDVVTD ELDELAEESG ELVQFATEEH GRAVYLYKTG GDRAVQTASS IGKREYLHCL ALGKAILAHT PRERVEEIID RHGLKRYTPQ TITDREELFD ELEAVRERGY AFDEEEKIEG LHCVAAPVMA GEDEVLGAVS LSRPLSRMTG DQFKEEIPNM VTRSANVIEI NAKYS
|
| |