Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4350 |
Symbol | |
ID | 8744978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | - |
Start bp | 612130 |
End bp | 613014 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646514890 |
Product | UspA domain protein |
Protein accession | YP_003405837 |
Protein GI | 284167559 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.252521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGACC GGATACTGAT CGCGGTCGAC GGAAGCGACG AGGCCGAGCG GGCGGCAGAG CGCGGACTTG AGTTCGCGCG CGCCTTCGAT GCGGCCGTCG ACGCCGTCTA CGTCGTCGAC TCGAAGGCGC TGCGGGTCTC GAGTCCCGGT TCCGAAACGG TTCGCCTTCG AGAACGGGGT GAGGCGGTGC TCGAGAAAAT CGAGGCGCTC GCGTCCGATC TCGACCAGTC CGTAACGACG GAACTGGTCG AGGGAAAGCC CGCAGACCGG ATCATGGCGC GCGCTGCCGA CCAGGATGCG GGGCTGATCG TCGTCGGCAG ACGGGGACAT ACGGGGCTCG GAAAGCGACT CCTCGGTGGC GTCACAGAGC GGCTCCTCCA TCGGAGCGAC GTCCCCGTCT TCGTCGTCCC GAGGGGAGCT TCGGACGCAG TGGCCGACTA CTCCGACCTG CTGGTTCCGA CGGACGGGAG CGAACCCGCG GCTATCGCGG GACGACACGG CGCCGCGGTC GCACGGGAGT ACGGATCGAC GATTCACGTG TTGAACGTGG TCGATCTGCA GGCCGCGGGC GGCGCGTTCG CCGCGGGCGG CCTCGGAACG GAGTTCATCG AACGACACGA GGCGGAGGGC GAGGAAATCG TCGAGGACGC GGCGGCAGAA ATCGAAGACG CGGCGCCGGC CGTCACGACC GCGGTTGTCC GGACGACGTC CTTCGACGGC GTCGCGGCCG GCGTTCGCGA GTACGTCGAC GAGGCCGATA TCGACCTACT CGTCGTGGGT GCCCGCAGCC GGTCGCGCCT CGGCCGCCGA ATCCTCGGGA GCGTCACCTC GACGCTCTTG CGGACGGTCG ACGTCCCCGT ACTGGTCGCG ATGCGTTCGT CGTGA
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Protein sequence | MYDRILIAVD GSDEAERAAE RGLEFARAFD AAVDAVYVVD SKALRVSSPG SETVRLRERG EAVLEKIEAL ASDLDQSVTT ELVEGKPADR IMARAADQDA GLIVVGRRGH TGLGKRLLGG VTERLLHRSD VPVFVVPRGA SDAVADYSDL LVPTDGSEPA AIAGRHGAAV AREYGSTIHV LNVVDLQAAG GAFAAGGLGT EFIERHEAEG EEIVEDAAAE IEDAAPAVTT AVVRTTSFDG VAAGVREYVD EADIDLLVVG ARSRSRLGRR ILGSVTSTLL RTVDVPVLVA MRSS
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