Gene Htur_4199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4199 
Symbol 
ID8744827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand+ 
Start bp468549 
End bp469217 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID646514747 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003405694 
Protein GI284167416 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.275628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTCA TTGGGAAGAT GGAAATAGGG CGTCCGGTGG GCCAAAAGGC ATTGAAAGCC 
GTTCCAGATA TGATACTCGA GATCGAGGAT ATTCGTTCGT TGGCCGACGA ACCGTTTAAA 
TTCATTTTTT GGGCGTCAAA TGACGATTTT CAGACATACG AATCTGCACT AACCGATGAC 
CCTTCGGTTT CTGACTACAA ATGCCTCACC GAATTACCTG AGCGACGCCT CTACCAGATA 
CAACTCTCAG AAGAAGGCCA ACAGAACACG CTTCAACCCA TTGCCGTAGA GCAGGATATT 
GTTCCTATTA GTCTGACGAT GACGGTTGAA GGCGTAGAAT TCGTGGGTCG GTTCCCGTCC 
CGAAGTGCGA TAATCACTCT TAAAGAAAAG TGTGAAGAGC TAGATAGACA TTTTAGATTG 
ATTAATCTGT ACGAGGAGAA ACCCGTTGAG AAGGATGGTG GCCGTACCAA CAGATACGGC 
GTTACAAGCA GTCAACGTGG TGCCCTGATC GCGGCGTTAG AAAAAGGATA CTTCAACGTG 
CCGCGGGAAA CGCGGATGGA AGATATCGCC GATGAACTCG ACATCTCGAC GTCCGCTCTA 
TCGGCTCAAC TGCGACGCGG ACAGAAAGCA CTGCTTCGCC ACACCTTAGC TAATGGGTCA 
TCGATATAA
 
Protein sequence
MSLIGKMEIG RPVGQKALKA VPDMILEIED IRSLADEPFK FIFWASNDDF QTYESALTDD 
PSVSDYKCLT ELPERRLYQI QLSEEGQQNT LQPIAVEQDI VPISLTMTVE GVEFVGRFPS 
RSAIITLKEK CEELDRHFRL INLYEEKPVE KDGGRTNRYG VTSSQRGALI AALEKGYFNV 
PRETRMEDIA DELDISTSAL SAQLRRGQKA LLRHTLANGS SI