Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4188 |
Symbol | |
ID | 8744816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | + |
Start bp | 456832 |
End bp | 457239 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 646514736 |
Product | UspA domain protein |
Protein accession | YP_003405683 |
Protein GI | 284167405 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0572657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGAGA TACTGATTCC CATCGACACC GACGAGAGCC GTGTCGAGCG GCAGATTCGA ACGATCCTCG AATTACCGAT CGAGACCGAT ACCGTCTCCG TAACGGTGCT GCACGTCTTC TCGGACAATC CGGCCGGTGC ATCGATTTCA CAACTCCAGA CGGCGCGATC CGCCGAAGAG CGACTCGAGG CCGCCGGGAT CGACGTTCGT CTCGATGAAC GAAGCGGCGA TCCGGCGCCG GAGATTCTCG CCTACGCGGA CGAAATAGAC GCAGATCTGG TCTGTCTGGC CGGCCGAAAG CGATCACCGA CGGGGAAGGC CCTGTTCGGG AGCGTCACGC AGGACGTGAT TTTGAGCACC GACCGGTCGG TCCTTATCGC CGGGAGCTCC GAAACGAGCC GTTCGTAA
|
Protein sequence | MIEILIPIDT DESRVERQIR TILELPIETD TVSVTVLHVF SDNPAGASIS QLQTARSAEE RLEAAGIDVR LDERSGDPAP EILAYADEID ADLVCLAGRK RSPTGKALFG SVTQDVILST DRSVLIAGSS ETSRS
|
| |