| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4093 |
|---|
| Symbol | |
|---|
| ID | 8744721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 352632 |
|---|
| End bp | 353642 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646514653 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003405600 |
|---|
| Protein GI | 284167322 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.105746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACT ACGTAAAGCG TGTGATCCGA TCGTTCGTGA CTCTGGTGCT GGTCATCACG
ATCACGTTCG GTCTGACACG TCTGATGCCC GGCGGCCCTG TCGATTACAT GCGAGCGAAA
CTTCGCAAGC AAAATCCGAA CATGCCGTCC GAGCAGATCG ACCAGATGGT GCAGGCGTAC
GTCGGTGTCA AGCCGGACGA ACCGATCTAC GTGCAGTACC TGAACTACGT CACCAGCGTC
CTTCAGGGCG ACCTCGGCGA ATCGACGTAC TATAACGAGC CGGTCGCTCA GATCTACGCG
GAGGCGATCC CGTGGACGCT GTTCGTCCTC GGAACGGCGA TGCTCGTGAC GTTCGCGATT
TCGATCTCGC TCGGCGCGCT CCTCGCTTAC AAGGAGGGGA GTCGGCTTGA CTCGGCCGTA
AGCACTGTCG CAATCGTGAT GAACTCCGTC CCCTATTACG TGGCGGCGAT TGTTCTCATC
GCGATCTTCG TCACGAACCT AGGAATGTAT CCGCTCTCCG GCAGAACGAG CCTCGGCGTC
ACACCGGGCT TCAACCTCCC GTTCATAGTA GACGTGCTAC GACACGCGAC CCTGCCAATG
CTCTCGGTCA TTATCACGGG CTTCGGCGTC CAGACGCTCG CGATGCGGAG CAACAGTATC
AGAGTACTCG GAGAGGATTA CATCCGTGTC GCACGGTTGC GGATGCTCCC TACAAGTCGC
ATCGCGAACC AGTACGTGGC TCGGAACGCA ATCCTCCCGA TCTACACCGG CTTCGTCATC
CAGATCGGGT TCATCTTCGG GGGTTCGATC ATCCTCGAGG ACATTTTCCA GTATCCGGGC
GTCGGGTACT ACTTCTTCAA CGCGATCACG GCGCGCGACT ATCCGTTGAT GATGGGTGGA
TTCCTCATCA TATCGGTCGC AGTCGTCATC GCGGTCACGA TCGCCGATCT CACCTACGGG
CTGATCGATC CGCGTGCGGG TGCCGGGGGT GATTCCAGTG AAGCCTACTG A
|
|---|
| Protein sequence | MNYYVKRVIR SFVTLVLVIT ITFGLTRLMP GGPVDYMRAK LRKQNPNMPS EQIDQMVQAY
VGVKPDEPIY VQYLNYVTSV LQGDLGESTY YNEPVAQIYA EAIPWTLFVL GTAMLVTFAI
SISLGALLAY KEGSRLDSAV STVAIVMNSV PYYVAAIVLI AIFVTNLGMY PLSGRTSLGV
TPGFNLPFIV DVLRHATLPM LSVIITGFGV QTLAMRSNSI RVLGEDYIRV ARLRMLPTSR
IANQYVARNA ILPIYTGFVI QIGFIFGGSI ILEDIFQYPG VGYYFFNAIT ARDYPLMMGG
FLIISVAVVI AVTIADLTYG LIDPRAGAGG DSSEAY
|
|---|
| |