| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4043 |
|---|
| Symbol | |
|---|
| ID | 8744671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 297153 |
|---|
| End bp | 298910 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646514609 |
|---|
| Product | urocanate hydratase |
|---|
| Protein accession | YP_003405556 |
|---|
| Protein GI | 284167278 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2987] Urocanate hydratase |
|---|
| TIGRFAM ID | [TIGR01228] urocanate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.487767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATACG TACGCATGAA ACAGCAACAG ACGGACGATG ACTCGACAGA TAAGATCGGC
AGTCCCTCGT CGGAGTGGCT AGAGTATCAA GGTTCACCCA CCGGGACGGA TATCGAGTGT
GAGGGGTGGA GACAGGAAGC CGCCCTCCGA ATGCTCAACA ACAATCTCGA TCCGGAAGTC
GGAGAGAAAC CGGAAGATCT CGTAGTGTAC GGCGGTACTG GTCGGGCAGC CCGGAGCTGG
GATGCATACG ATACGATTCT CTCGGAGCTA CGGACGCTTG CCGATGACGA AACGCTACTA
GTCCAGTCGG GGAAACCGGT CGGCCGATTC AAGACTCACG AACGTTCGCC ACAGGTGCTT
ATTGCTAATT CGAACCTGGT CGGCGCTTGG GACGACTGGG AGCACTTCCA CGAACTTGAA
TCAAAGGGGC TTATCATGTA CGGCCAGATG ACCGCCGGAT CGTGGGCGTA TATCGGAACG
CAGGGTATTA TTCAAGGGAC CTTCGAGACA TTGGCCGAAG CGGCTCGCCA ACACTTCCCC
GAGCGGGAGG GGCTGGAAGG AACGGTCACA GTCACCGCTG GCCTCGGTGG TATGGGTGGA
GCACAACCGC TAGCTGTGAC GATGAATCAT GGCGTGTGTA TCGCGGCTGA GGTCGACGAA
CACCGGATCG ACAGACGGAT CGAGACGGAC TACTGTATGG AGAAGACAGA CGACCTGGAC
GAGGCTATTG AGATGGCCGA AGATGCGGCA GCGAACGGTG AACCGCTCTC TATCGCCCTC
CACATGAATG CTGCCGATAT GTTCGACGGG CTGCTTGAAC GCGACTTCGT CCCGGACATC
GTCACCGACC AGACAAGCGC GCACGACGAA CTCGAAGGCT ACTACCCCGC CGGTTACACT
GTGGAGGAGG CCGACGCGTT ACGCGAGGCG GATCCCGACC GGTACGTCGA AGAGAGCCTC
GACACGATGC AACGTCACGT CGAAGGCATC CTCGAAATGC AAGAGCGCGG TGCGGTGGCC
TTCGAGTACG GGAACAACAT TCGTGGACAA GTCGAGGAGC ACCGAGAGAT GGCGAGCGCA
TTCGATTTCC CGGGGTTCGT CCCGGCGTAC ATCCGACCCC TGTTCTGCCA GGGGAAGGGA
CCCTTCCGTT GGGTCGCTCT CTCTGGAGAC GAAGAGGACA TCCATCGGAC TGACGACGCT
ATCAAGGAAC TCTTTCCCGA GAAAGACCAA CTGCACCGCT GGATCGATCT CGCACAGGAA
CAGGTTTCGT TCCAAGGTCT CCCCAGCCGT GTCTGCTGGC TCGGGTACCA GAGCGACGAC
GGCCTAACCG AGCGTGCGCG ATTTGCGCTT CGAATTAACG AACTCGTCGA CGAAGGCGAG
ATTGCGGCGC CCGTCGTCGT CACACGCGAT CACCTCGATG CTGGCAGTGT GGCTAGCCCG
AACCGAGAGA CTGAAGCTAT GCGAGACGGC TCGGATGCCG TCGCCGACTG GCCTATCCTG
AACGCTCTGC TCAACTGCGC TGCCGGCGCT GATATCGTCA GCGTTCACGA TGGGGGTGGC
GTCGGTATTG GCAACTCCCT TCATACCAAC AACCACGTCG TCCTCGACGG CTCCGACCTC
GCTGCTGAAA AGGCCCGCCG CGTGTTTACG ACTGACCCCG GCATGGGTGT CATCCGCCAC
GCCGACGCTG GGTACGACGA AGCGCTCAAC GAGGCAACGA CTTCGGATGT CCACGTCCCG
ATGGCTGAGA ACAAATGA
|
|---|
| Protein sequence | MIYVRMKQQQ TDDDSTDKIG SPSSEWLEYQ GSPTGTDIEC EGWRQEAALR MLNNNLDPEV
GEKPEDLVVY GGTGRAARSW DAYDTILSEL RTLADDETLL VQSGKPVGRF KTHERSPQVL
IANSNLVGAW DDWEHFHELE SKGLIMYGQM TAGSWAYIGT QGIIQGTFET LAEAARQHFP
EREGLEGTVT VTAGLGGMGG AQPLAVTMNH GVCIAAEVDE HRIDRRIETD YCMEKTDDLD
EAIEMAEDAA ANGEPLSIAL HMNAADMFDG LLERDFVPDI VTDQTSAHDE LEGYYPAGYT
VEEADALREA DPDRYVEESL DTMQRHVEGI LEMQERGAVA FEYGNNIRGQ VEEHREMASA
FDFPGFVPAY IRPLFCQGKG PFRWVALSGD EEDIHRTDDA IKELFPEKDQ LHRWIDLAQE
QVSFQGLPSR VCWLGYQSDD GLTERARFAL RINELVDEGE IAAPVVVTRD HLDAGSVASP
NRETEAMRDG SDAVADWPIL NALLNCAAGA DIVSVHDGGG VGIGNSLHTN NHVVLDGSDL
AAEKARRVFT TDPGMGVIRH ADAGYDEALN EATTSDVHVP MAENK
|
|---|
| |