| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3901 |
|---|
| Symbol | |
|---|
| ID | 8744529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 145266 |
|---|
| End bp | 146450 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646514485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003405432 |
|---|
| Protein GI | 284167154 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0134044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACG AGTTACGACA GGGGCCGAAC GCCGGCCGAA CGCTACCGTC GGAGTGCGAC
CGATACGCGG ATCCGGAGAC CGGCGCGCGG GTCACGCGGT TGACGAGCGA TTCGAACGCC
GACAGCCGAC ATCTGTACTT CACCGAACCG GGGTGGTACG ACGACGGCCG TAAGCTGCTC
GTCCGCTCGG ATCGCGACGG AACGCAGCAG CTCTACTCGA TCGCCCTCGA GTCCGGCGAG
ATCACGCAGC TGACCGACCT CCCCGCGGCG ATCAGCGGCG TCACCCGCGT CGCGACCGAG
TCGACGGCGC TGTTCTGGTG CGACGATCGG CTCGTCACGC TCGATCTCGA GTCCCTCGAG
GTGACGCCGC TGTACGAACG CCCCGACGGC TACGCGGGGA GCATCGCCGC GGGGACGGCC
AATGGGGAAC GAGCCGTTGT CGCGCTCTCG GAGAAGCTCG ACATCGAGGG ACGGTCGGCC
GATCGCGAGC AGTGGATCGC CGACCGGATG GACGCCGGTC CCCACTCGAA GGTGCTCTCG
ATCCCGCTCT CCGGCGGCGA GCCGACGGTC CACGTCGAGG ACGATCGGTG GCTCAACCAC
GTCAACGCGT CGCCGACCCG GCCCGAACTC GTCACGTACT GCGAGGAGGG AACGTGGGAG
GACGTCGATC GAATCCGGGT GTTGAACCTC GAGACGGACG AGACGTGGCC GGTCCGACAG
ACCGGAGAGG ACGAGGCCGT CGGCCACGAG TACTGGCTCG CCGACGGCGA GACGATCGGC
TACCACGGCT GGCGGGGTCG CCGCGACGAT CCGGCGGCGT TCTTCGGGCA CGTTCGATAC
AACGGCACGG AGCGGTACGA GTGGCCGGCG CCGGACATCT ACACGCATTT CCACAGCAAC
TCTCGCGACC TGGTCGTCGG AGACGGTACG TACCGCGGCG CTCCGTTCGA TCTTCTTTGG
GAGTGGGACG ACGACACCGG CGGGTACCGG ACGCCGCGAA AACTGGCCGT CCACGGCTGG
AGCGGCGACG ATGACGTTCA CCCCCACTCG AGGTTGAGTC CCGACGGAGA CAGCATCGTC
TTCGATAGCT CCCGCGCTCG CGACGGCGAC GGCAGCGACG TCTACCTCGT CGATGTTCCC
GACGACCTCG ACGAACTCCC GGCATTCGAG GGCGTAGCGG AGTAG
|
|---|
| Protein sequence | MADELRQGPN AGRTLPSECD RYADPETGAR VTRLTSDSNA DSRHLYFTEP GWYDDGRKLL
VRSDRDGTQQ LYSIALESGE ITQLTDLPAA ISGVTRVATE STALFWCDDR LVTLDLESLE
VTPLYERPDG YAGSIAAGTA NGERAVVALS EKLDIEGRSA DREQWIADRM DAGPHSKVLS
IPLSGGEPTV HVEDDRWLNH VNASPTRPEL VTYCEEGTWE DVDRIRVLNL ETDETWPVRQ
TGEDEAVGHE YWLADGETIG YHGWRGRRDD PAAFFGHVRY NGTERYEWPA PDIYTHFHSN
SRDLVVGDGT YRGAPFDLLW EWDDDTGGYR TPRKLAVHGW SGDDDVHPHS RLSPDGDSIV
FDSSRARDGD GSDVYLVDVP DDLDELPAFE GVAE
|
|---|
| |