| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3886 |
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| Symbol | |
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| ID | 8744514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 118198 |
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| End bp | 119217 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646514470 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003405417 |
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| Protein GI | 284167139 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.431953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGA ATTATTTCGC GAAGCGCGTT GGACAGGCGC TGCTGACGTT TTTCGCGACA
GTGACGCTAA CGTTCGTTCT GTACCAGATG ATGCCAGGTG GCCCTGCTCA GGCGCTTCGA
AACCAGATCC TCGCCCAGCA GATGGGCTCG TCGAACACGA TCAGTCCGGA GCAGATCGAA
CAGCTAGTCG AGAACTATAC GAATCTCGAG AGCGACGCAC CGATTTACGT ACAGTATTTC
CAGTACATGA GCAGCGTCTT CCTCGAGTTC GATCTCGGCG AGTCGCTCTA CGAGGATGCC
ACCGTCACGT CGCTCCTCGC CGAGCGACTC CCGTGGTCGA TGCTCATCAG CGTCTACGCG
ATGGTCATCG GCTACACCGT GAGCATCGTG CTCGGCGCGG TGATGGCCTT CAAGGAGAAA
TCCAGGTTCG ACTCGGTGTC GTCCGTCGTC GTTATCGGGC TCAACTCCAC GCCGTACTAC
GTCGCGGGGA TTCTGTTCAT CTTCTTCTTC AGCATTCGGT ACCAGTTCTT CCCGACGGGC
GGACGAGTCG GACTCGGTAT CGAAGAGGGG TTCAACCTGG CGTTCATGCA GAGTATCGCG
CTCCACGCCG CGCTACCGAT ACTGTCGATG AGCGTGCTCG GGCTCGGCAC GGCGCTGACG
ATGCGGGGCA ACTCCGTCCG CGTCCTCGGG GAGGACTACC TCCGCGTCGC GGAGCTGCGC
GGGCTGCGTA ACTCCCGCAT CGCGACCCAG TACGTGGGAC GGAACGCCAT CCTGCCGATG
TACACGCAGT TCATGATCGG CATCGCCGGC GTGCTCAGCA GCTCCGTCAT CGTCGAGGAG
ATCTTCTCCT ACCCGGGCGT GGGACTGCTA GTGTACGACG CCATCCAGGT GAGAAACTAT
CCCGTGCTCA TGGGATCGCT CATCGTCTTC ACGCTCGTGA CGATCGTCGC GATCCTGATC
GCGGATCTGA CGTACGGCTT CATCGACCCC CGAATCTCGG CCGGAGGCAA CAATGAGTAA
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| Protein sequence | MQGNYFAKRV GQALLTFFAT VTLTFVLYQM MPGGPAQALR NQILAQQMGS SNTISPEQIE
QLVENYTNLE SDAPIYVQYF QYMSSVFLEF DLGESLYEDA TVTSLLAERL PWSMLISVYA
MVIGYTVSIV LGAVMAFKEK SRFDSVSSVV VIGLNSTPYY VAGILFIFFF SIRYQFFPTG
GRVGLGIEEG FNLAFMQSIA LHAALPILSM SVLGLGTALT MRGNSVRVLG EDYLRVAELR
GLRNSRIATQ YVGRNAILPM YTQFMIGIAG VLSSSVIVEE IFSYPGVGLL VYDAIQVRNY
PVLMGSLIVF TLVTIVAILI ADLTYGFIDP RISAGGNNE
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