Gene Htur_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3804 
Symbol 
ID8744432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp26289 
End bp27032 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID646514392 
ProductABC transporter related protein 
Protein accessionYP_003405339 
Protein GI284167061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0651651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC AGGCGCTCCC CGACCGTGAC CGCGAGACAG ACGGTCGGAT TCTCGAGGCG 
AGTTCGCTGT CGGTTTCCTA CGGACAGGTG TCGGCGCTTC GCGACGTCAA TCTGACGGTC
CGCGAGGGAG AGATCGCCTC GATCATCGGC CCGAACGGCG CCGGGAAGAC CACCTTCGCG
GACACCGTCG CGGGCCACCT CCCGTACGAC GGGTCGATCA CGTACGACGG GCGGGAAGTG
GCCGACGTGA AACGATCGAC GCTGGTCGAA CGGGGAATGA TCTACTGCAC CGAGAAGCGG
GATCTGTTCC CCTTCATGGA CGTCGAAGAG AACCTCCGGT TAGGAGCGTA CCGGAGTCGA
GATTCCCTGG AGGAGAACCT CGAGTTCGTC TACGACGTCT TCCCGAAACT TGAGGAGCGC
AGGGACCAGG AAGCGCGGAC GATGTCCGGC GGCGAACAGC AGATGCTCGC CCTCGGCCGG
GGCTTGATGG GCGATCCGGA ACTGCTGATC CTCGACGAAC CGACGATCGG GCTCGCGCCC
GTCATCATCG ACGACATCAG CGACGCCTTC GAACCGATTC TGGACCGCGG CGTCACCGTC
CTCCTGACCG AACAGAACGC GACCTTCGCG CTCAACCACG CGGACACGAT CCACCTCCTC
GAAAACGGCC GGGTCGTCAA ATCAGGGGCG GCCGACGAGA TGAAAGGCGA CGACTACATC
CGCGAGACGT ACCTCGGCGG GTAA
 
Protein sequence
MSEQALPDRD RETDGRILEA SSLSVSYGQV SALRDVNLTV REGEIASIIG PNGAGKTTFA 
DTVAGHLPYD GSITYDGREV ADVKRSTLVE RGMIYCTEKR DLFPFMDVEE NLRLGAYRSR
DSLEENLEFV YDVFPKLEER RDQEARTMSG GEQQMLALGR GLMGDPELLI LDEPTIGLAP
VIIDDISDAF EPILDRGVTV LLTEQNATFA LNHADTIHLL ENGRVVKSGA ADEMKGDDYI
RETYLGG